RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 TMEM74Q96NL1 305 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 HOPXQ9BPY8 73 aaPredicted RBP18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 EBPLQ9BY08 206 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 IL1RL2Q9HB29 575 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 SLAMF8Q9P0V8 285 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 TAAR2Q9P1P5 351 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 RUVBL1Q9Y265 456 aaKnown RBP18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 PCM1Q15154 2024 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 TRBV23OR9-2A0A075B6M9 112 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 KDM1AO60341 852 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 SF1Q15637 639 aaKnown RBP18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 FAM174BQ3ZCQ3 159 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 SPANXN4Q5MJ08 99 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 C6orf163Q5TEZ5 329 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 SLC2A7Q6PXP3 512 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 FAM9CQ8IZT9 166 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 C1orf52Q8N6N3 182 aaKnown RBP18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 ANKRD53Q8N9V6 530 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 CXorf40BQ96DE9 158 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 ZBTB18Q99592 522 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 AIF1LQ9BQI0 150 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 GSDMCQ9BYG8 508 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 RHBGQ9H310 441 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 GID8Q9NWU2 228 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 SPHK1Q9NYA1 384 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 ADA2Q9NZK5 511 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 OR6C2Q9NZP2 312 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 PPT2Q9UMR5 302 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 AXIN1O15169 862 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 TBX6O95947 436 aaPredicted RBP18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 TGFB1P01137 390 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 REEP5Q00765 189 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 NFYCQ13952 458 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 SPIN4Q56A73 249 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 ARMCX6Q7L4S7 300 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 AMIGO1Q86WK6 493 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 DCP2Q8IU60 420 aaKnown RBP18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 OR51B5Q9H339 312 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 DLGAP2Q9P1A6 1054 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 ABCD2Q9UBJ2 740 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 CD300AQ9UGN4 299 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 MUC3AQ02505 3323 aa18.79■□□□□ 0.6
RBFOX1-215ENST00000553186 USP34Q70CQ2 3546 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 PRORSD1PA6NEY8 169 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 IL6P05231 212 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 PGRP06401 933 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 XRCC1P18887 633 aaPredicted RBP18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 ME2P23368 584 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 SLC6A2P23975 617 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 CXCR2P25025 360 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 CD38P28907 300 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 SHMT2P34897 504 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 SLC7A2P52569 658 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 CSNK1G2P78368 415 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 FOXM1Q08050 763 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 CAPRIN1Q14444 709 aaKnown RBP18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 RBBP5Q15291 538 aaKnown RBP18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 GALNT18Q6P9A2 607 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 OR4E2Q8NGC2 313 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 C1orf216Q8TAB5 229 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 LCN9Q8WX39 176 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 PITHD1Q9GZP4 211 aaPredicted RBP18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 TWSG1Q9GZX9 223 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 RNPEPL1Q9HAU8 725 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 SIRT5Q9NXA8 310 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 KNL1Q8NG31 2342 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 MAP3K13O43283 966 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 NPPAP01160 153 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 BCKDHBP21953 392 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 MSX2P35548 267 aaPredicted RBP18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 RACK1P63244 317 aaKnown RBP18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 DLEU7Q6UYE1 221 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 MAMSTRQ6ZN01 415 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 FAM20CQ8IXL6 584 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 SLC15A3Q8IY34 581 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 SLC13A3Q8WWT9 602 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 PATE1Q8WXA2 126 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 TESCQ96BS2 214 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 HSPA12BQ96MM6 686 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 NT5DC2Q9H857 520 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 NMRK1Q9NWW6 199 aa18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 NKX1-2Q9UD57 310 aaPredicted RBP18.78■□□□□ 0.6
RBFOX1-215ENST00000553186 FEZF1A0PJY2 475 aa18.77■□□□□ 0.6
RBFOX1-215ENST00000553186 MAP3K7O43318 606 aa18.77■□□□□ 0.6
RBFOX1-215ENST00000553186 CHRM5P08912 532 aaPredicted RBP18.77■□□□□ 0.6
RBFOX1-215ENST00000553186 ERFP50548 548 aa18.77■□□□□ 0.6
RBFOX1-215ENST00000553186 BLKP51451 505 aa18.77■□□□□ 0.6
RBFOX1-215ENST00000553186 CLNS1AP54105 237 aaKnown RBP18.77■□□□□ 0.6
RBFOX1-215ENST00000553186 PHC1P78364 1004 aa18.77■□□□□ 0.6
RBFOX1-215ENST00000553186 MS4A2Q01362 244 aa18.77■□□□□ 0.6
RBFOX1-215ENST00000553186 DMWDQ09019 674 aa18.77■□□□□ 0.6
RBFOX1-215ENST00000553186 CCNIQ14094 377 aa18.77■□□□□ 0.6
RBFOX1-215ENST00000553186 IQCHQ86VS3 1027 aa18.77■□□□□ 0.6
RBFOX1-215ENST00000553186 SFTPA2Q8IWL1 248 aa18.77■□□□□ 0.6
RBFOX1-215ENST00000553186 KIAA2013Q8IYS2 634 aa18.77■□□□□ 0.6
RBFOX1-215ENST00000553186 ADGRF3Q8IZF5 1079 aa18.77■□□□□ 0.6
RBFOX1-215ENST00000553186 ENDOVQ8N8Q3 282 aaKnown RBP18.77■□□□□ 0.6
RBFOX1-215ENST00000553186 FAM156AQ8NDB6 213 aa18.77■□□□□ 0.6
RBFOX1-215ENST00000553186 GPR156Q8NFN8 814 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms