RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 THAP11Q96EK4 314 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 SLC45A3Q96JT2 553 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 PRAP1Q96NZ9 151 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 GPR78Q96P69 363 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 GBP5Q96PP8 586 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 OR2A5Q96R48 311 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 SARGQ9BW04 601 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 VPS11Q9H270 941 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 PRORYQ9H606 182 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 PELI2Q9HAT8 420 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 CPNE5Q9HCH3 593 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 TXLNGQ9NUQ3 528 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 WDR70Q9NW82 654 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 KCND3Q9UK17 655 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 PTBP2Q9UKA9 531 aaKnown RBP11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 DYRK1BQ9Y463 629 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 PCDHGA6Q9Y5G7 932 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 KCNE2Q9Y6J6 123 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 KCNE1BA0A087WTH5 132 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 LOC105369274A0A096LPK9 316 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 LOC102723532A0A0G2JNH3 316 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 TRBC2A0A5B9 178 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 ZNF891A8MT65 544 aaPredicted RBP11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 C9J4A7 227 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 H0YGG7 62 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 UBXN8O00124 270 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 TXNDC9O14530 226 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 DSCR3O14972 297 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 SHBGP04278 402 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 TUBBP07437 444 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 NUDT17P0C025 328 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 RAB40ALP0C0E4 278 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 WT1P19544 449 aaPredicted RBP11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 GLRBP48167 497 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 ARF3P61204 181 aaPredicted RBP11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 REEP5Q00765 189 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 CDC16Q13042 620 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 DNASE1L3Q13609 305 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 CRTC2Q53ET0 693 aaPredicted RBP11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 WASHC2DQ5SRD0 308 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 FBXO42Q6P3S6 717 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 C19orf48Q6RUI8 117 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 TMPRSS11BQ86T26 416 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 OR4N4Q8N0Y3 316 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 TBC1D19Q8N5T2 526 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 CSNK1A1LQ8N752 337 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 OR4K1Q8NGD4 311 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 STARD8Q92502 1023 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 TSNARE1Q96NA8 513 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 C17orf62Q9BQA9 187 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 GPR87Q9BY21 358 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 NLNQ9BYT8 704 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 SYNPO2LQ9H987 977 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 CUTCQ9NTM9 273 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 DNAJC11Q9NVH1 559 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 GPRC5BQ9NZH0 403 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 DHCR7Q9UBM7 475 aaKnown RBP11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 RAB21Q9UL25 225 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 SLC22A14Q9Y267 594 aa11.19□□□□□ -0.62
TRAFD1-209ENST00000552896 TAPBPO15533 448 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 P2RX6O15547 441 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 KLK8O60259 260 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 CDH16O75309 829 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 RFPL1O75677 317 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 STK16O75716 305 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 RBP1P09455 135 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 MTHFD2P13995 350 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 GNAZP19086 355 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 AGXTP21549 392 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 BCL6P41182 706 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 KCNC1P48547 511 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 HSPA7P48741 367 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 ALDH18A1P54886 795 aaKnown RBP11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 MC1RQ01726 317 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 SETDB1Q15047 1291 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 NCF4Q15080 339 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 PDK4Q16654 411 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 MUM1Q2TAK8 710 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 FAM214AQ32MH5 1076 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 C18orf21Q32NC0 220 aaPredicted RBP11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 GARNL3Q5VVW2 1013 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 VN1R4Q7Z5H5 301 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 PLD3Q8IV08 490 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 PLD6Q8N2A8 252 aaKnown RBP11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 ARHGEF39Q8N4T4 335 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 MREGQ8N565 214 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 ACMSDQ8TDX5 336 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 MZB1Q8WU39 189 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 FKBP10Q96AY3 582 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 MVB12AQ96EY5 273 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 CRELD1Q96HD1 420 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 C10orf90Q96M02 699 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 CAPS2Q9BXY5 557 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 PARD6BQ9BYG5 372 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 CHST8Q9H2A9 424 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 EHD1Q9H4M9 534 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 XPR1Q9UBH6 696 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 IL17BQ9UHF5 180 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 TMCO1Q9UM00 188 aa11.18□□□□□ -0.62
TRAFD1-209ENST00000552896 FEZF1A0PJY2 475 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms