RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 NVLO15381 856 aaKnown RBP16.47■□□□□ 0.23
BRF1-217ENST00000550375 OR1F1O43749 312 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 TYROBPO43914 113 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 LCMT2O60294 686 aaKnown RBP16.47■□□□□ 0.23
BRF1-217ENST00000550375 PRAMEF4O60810 478 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 H2AFYO75367 372 aaKnown RBP16.47■□□□□ 0.23
BRF1-217ENST00000550375 SCRG1O75711 98 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 C1QTNF9P0C862 333 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 ZNF28P17035 718 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 BCL6P41182 706 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 ARF3P61204 181 aaPredicted RBP16.47■□□□□ 0.23
BRF1-217ENST00000550375 RPS15AP62244 130 aaKnown RBP16.47■□□□□ 0.23
BRF1-217ENST00000550375 NFKB2Q00653 900 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 CHIT1Q13231 466 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 DOC2AQ14183 400 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 SLBPQ14493 270 aaKnown RBP eCLIP16.47■□□□□ 0.23
BRF1-217ENST00000550375 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.47■□□□□ 0.23
BRF1-217ENST00000550375 WASHC2DQ5SRD0 308 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 PRAMEF9Q5VWM5 478 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 ATG9BQ674R7 924 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 BPHLQ86WA6 291 aaPredicted RBP16.47■□□□□ 0.23
BRF1-217ENST00000550375 ZFAND4Q86XD8 727 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 SLC22A9Q8IVM8 553 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 ARL8AQ96BM9 186 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 TEFMQ96QE5 360 aaKnown RBP16.47■□□□□ 0.23
BRF1-217ENST00000550375 OR2A5Q96R48 311 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 AIF1LQ9BQI0 150 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 ZPBPQ9BS86 351 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 ULBP3Q9BZM4 244 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 IPPKQ9H8X2 491 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 VIPAS39Q9H9C1 493 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 KCNK9Q9NPC2 374 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 SEMA4BQ9NPR2 832 aaPredicted RBP16.47■□□□□ 0.23
BRF1-217ENST00000550375 PCTPQ9UKL6 214 aa16.47■□□□□ 0.23
BRF1-217ENST00000550375 SASH3O75995 380 aa16.46■□□□□ 0.23
BRF1-217ENST00000550375 KIAA0754O94854 1291 aa16.46■□□□□ 0.23
BRF1-217ENST00000550375 NTRK1P04629 796 aa16.46■□□□□ 0.23
BRF1-217ENST00000550375 TSPAN8P19075 237 aa16.46■□□□□ 0.23
BRF1-217ENST00000550375 IMPDH1P20839 514 aa16.46■□□□□ 0.23
BRF1-217ENST00000550375 ARL1P40616 181 aaPredicted RBP16.46■□□□□ 0.23
BRF1-217ENST00000550375 PRKAA2P54646 552 aa16.46■□□□□ 0.23
BRF1-217ENST00000550375 HERVK_113P63132 956 aa16.46■□□□□ 0.23
BRF1-217ENST00000550375 REEP5Q00765 189 aa16.46■□□□□ 0.23
BRF1-217ENST00000550375 IRF8Q02556 426 aa16.46■□□□□ 0.23
BRF1-217ENST00000550375 RBBP5Q15291 538 aaKnown RBP16.46■□□□□ 0.23
BRF1-217ENST00000550375 TBC1D25Q3MII6 688 aa16.46■□□□□ 0.23
BRF1-217ENST00000550375 ZNF655Q8N720 491 aaPredicted RBP16.46■□□□□ 0.23
BRF1-217ENST00000550375 RDH11Q8TC12 318 aa16.46■□□□□ 0.23
BRF1-217ENST00000550375 PPP4R1Q8TF05 950 aa16.46■□□□□ 0.23
BRF1-217ENST00000550375 RERGQ96A58 199 aaPredicted RBP16.46■□□□□ 0.23
BRF1-217ENST00000550375 ZNF578Q96N58 590 aaPredicted RBP16.46■□□□□ 0.23
BRF1-217ENST00000550375 TMEM237Q96Q45 408 aa16.46■□□□□ 0.23
BRF1-217ENST00000550375 TMEM121BQ9BXQ6 578 aaPredicted RBP16.46■□□□□ 0.23
BRF1-217ENST00000550375 ERVK-6Q9BXR3 956 aa16.46■□□□□ 0.23
BRF1-217ENST00000550375 CCDC86Q9H6F5 360 aaKnown RBP16.46■□□□□ 0.23
BRF1-217ENST00000550375 NOL11Q9H8H0 719 aaKnown RBP16.46■□□□□ 0.23
BRF1-217ENST00000550375 GEMIN8Q9NWZ8 242 aaKnown RBP16.46■□□□□ 0.23
BRF1-217ENST00000550375 COPG2Q9UBF2 871 aa16.46■□□□□ 0.23
BRF1-217ENST00000550375 MID2Q9UJV3 735 aa16.46■□□□□ 0.23
BRF1-217ENST00000550375 ACTL7BQ9Y614 415 aa16.46■□□□□ 0.23
BRF1-217ENST00000550375 TRBC2A0A5B9 178 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 ZNF749O43361 778 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 SRPX2O60687 465 aaPredicted RBP16.45■□□□□ 0.22
BRF1-217ENST00000550375 KATNA1O75449 491 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 STK17BO94768 372 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 SUPT7LO94864 414 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 RPS17P08708 135 aaKnown RBP16.45■□□□□ 0.22
BRF1-217ENST00000550375 PIK3CGP48736 1102 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 CDH13P55290 713 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 ERVPABLB-1P60509 514 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 MAGOHP61326 146 aaKnown RBP16.45■□□□□ 0.22
BRF1-217ENST00000550375 RELAQ04206 551 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 RBBP7Q16576 425 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 UNC50Q53HI1 259 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 TCTE1Q5JU00 501 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 ZNF678Q5SXM1 525 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 METTL2BQ6P1Q9 378 aaKnown RBP16.45■□□□□ 0.22
BRF1-217ENST00000550375 UNQ6494/PRO21346Q6UXR6 183 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 MYLK4Q86YV6 388 aaPredicted RBP16.45■□□□□ 0.22
BRF1-217ENST00000550375 TBC1D19Q8N5T2 526 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 CSNK1A1LQ8N752 337 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 CCNYL1Q8N7R7 359 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 MFSD9Q8NBP5 474 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 ZNF483Q8TF39 744 aaPredicted RBP16.45■□□□□ 0.22
BRF1-217ENST00000550375 ATP6V1E2Q96A05 226 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 CCDC126Q96EE4 140 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 PTCD3Q96EY7 689 aaKnown RBP16.45■□□□□ 0.22
BRF1-217ENST00000550375 MACROD1Q9BQ69 325 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 B3GNT4Q9C0J1 378 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 SLC7A5P2Q9GIP4 190 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 ACTR8Q9H981 624 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 SSU72Q9NP77 194 aaKnown RBP16.45■□□□□ 0.22
BRF1-217ENST00000550375 ZNF446Q9NWS9 450 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 PCDHGA4Q9Y5G9 962 aa16.45■□□□□ 0.22
BRF1-217ENST00000550375 AHCTF1Q8WYP5 2266 aa16.44■□□□□ 0.22
BRF1-217ENST00000550375 TEX51A0A1B0GUA7 166 aa16.44■□□□□ 0.22
BRF1-217ENST00000550375 H3BMH7 237 aa16.44■□□□□ 0.22
BRF1-217ENST00000550375 OR7A17O14581 309 aa16.44■□□□□ 0.22
BRF1-217ENST00000550375 ZSCAN9O15535 394 aaPredicted RBP16.44■□□□□ 0.22
BRF1-217ENST00000550375 P2RX6O15547 441 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms