RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 FAM129CQ86XR2 697 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 ADGRF3Q8IZF5 1079 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 OR56A3Q8NH54 315 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 WDR36Q8NI36 951 aaKnown RBP16.73■□□□□ 0.27
HDAC7-227ENST00000548080 ZNF480Q8WV37 535 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 PMEPA1Q969W9 287 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 PYCR2Q96C36 320 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 NXPE2Q96DL1 559 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 PRR11Q96HE9 360 aaPredicted RBP16.73■□□□□ 0.27
HDAC7-227ENST00000548080 LRRC37BQ96QE4 947 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 MAP3K3Q99759 626 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 DPYSL5Q9BPU6 564 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 NTMT1Q9BV86 223 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 KLHL25Q9H0H3 589 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 POLR1BQ9H9Y6 1135 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 ABCF3Q9NUQ8 709 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 OCIAD1Q9NX40 245 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 SPHK1Q9NYA1 384 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 POLG2Q9UHN1 485 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 SLC22A14Q9Y267 594 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 ACACBO00763 2458 aa16.73■□□□□ 0.27
HDAC7-227ENST00000548080 ADAMTS20P59510 1910 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 IGHV5-51A0A0C4DH38 117 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 PLD2O14939 933 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 SKAP2O75563 359 aaPredicted RBP16.72■□□□□ 0.27
HDAC7-227ENST00000548080 JUNP05412 331 aaKnown RBP16.72■□□□□ 0.27
HDAC7-227ENST00000548080 SERPINB3P29508 390 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 PKLRP30613 574 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 ARL1P40616 181 aaPredicted RBP16.72■□□□□ 0.27
HDAC7-227ENST00000548080 FOXA1P55317 472 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 BTKQ06187 659 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 CDC16Q13042 620 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 CLPPQ16740 277 aaPredicted RBP16.72■□□□□ 0.27
HDAC7-227ENST00000548080 KLHL35Q6PF15 583 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 ARHGAP22Q7Z5H3 698 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 MTDHQ86UE4 582 aaKnown RBP16.72■□□□□ 0.27
HDAC7-227ENST00000548080 THOC6Q86W42 341 aaKnown RBP16.72■□□□□ 0.27
HDAC7-227ENST00000548080 FAM20CQ8IXL6 584 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 OR4F6Q8NGB9 312 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 ZDHHC12Q96GR4 267 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 PPP1R36Q96LQ0 422 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 CNTNAP3BQ96NU0 1288 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 CDK15Q96Q40 435 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 KCNA7Q96RP8 456 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 CCDC28BQ9BUN5 200 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 CNTNAP3Q9BZ76 1288 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 NRSN2Q9GZP1 204 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 MEAF6Q9HAF1 191 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 PDP2Q9P2J9 529 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 LNPEPQ9UIQ6 1025 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 DNAJC15Q9Y5T4 150 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 FREM2Q5SZK8 3169 aa16.72■□□□□ 0.27
HDAC7-227ENST00000548080 EFCAB7A8K855 629 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 TMX2-CTNND1H3BSU7 103 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 HGSO14964 777 aaPredicted RBP16.71■□□□□ 0.27
HDAC7-227ENST00000548080 CCDC22O60826 627 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 TNFSF15O95150 251 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 CHEK2O96017 543 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 ENO1P06733 434 aaKnown RBP16.71■□□□□ 0.27
HDAC7-227ENST00000548080 JMJD7P0C870 316 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 EBLN1P0CF75 366 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 EPORP19235 508 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 PEBP1P30086 187 aaKnown RBP16.71■□□□□ 0.27
HDAC7-227ENST00000548080 CSTF2P33240 577 aaKnown RBP eCLIP16.71■□□□□ 0.27
HDAC7-227ENST00000548080 HSD17B2P37059 387 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 PNLIPRP1P54315 467 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 ARHGAP19Q14CB8 494 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 LETMD1Q6P1Q0 360 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 ACAD11Q709F0 780 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 HOMEZQ8IX15 550 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 SYTL1Q8IYJ3 562 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 FITM2Q8N6M3 262 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 CDYL2Q8N8U2 506 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 LINC01555Q8NAE3 123 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 METTL6Q8TCB7 284 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 TWIST2Q8WVJ9 160 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 MED8Q96G25 268 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 WDR55Q9H6Y2 383 aaPredicted RBP16.71■□□□□ 0.27
HDAC7-227ENST00000548080 TCF7L2Q9NQB0 619 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 INTS7Q9NVH2 962 aaKnown RBP16.71■□□□□ 0.27
HDAC7-227ENST00000548080 EPHA6Q9UF33 1036 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 TIMM22Q9Y584 194 aa16.71■□□□□ 0.27
HDAC7-227ENST00000548080 GOLGA8QA0A0J9YX86 632 aa16.7■□□□□ 0.26
HDAC7-227ENST00000548080 GOLGA8OA6NCC3 632 aa16.7■□□□□ 0.26
HDAC7-227ENST00000548080 GOLGA8NF8WBI6 632 aa16.7■□□□□ 0.26
HDAC7-227ENST00000548080 SDHDO14521 159 aa16.7■□□□□ 0.26
HDAC7-227ENST00000548080 CLDN9O95484 217 aa16.7■□□□□ 0.26
HDAC7-227ENST00000548080 CHRM5P08912 532 aaPredicted RBP16.7■□□□□ 0.26
HDAC7-227ENST00000548080 PVRP15151 417 aa16.7■□□□□ 0.26
HDAC7-227ENST00000548080 EPHA3P29320 983 aa16.7■□□□□ 0.26
HDAC7-227ENST00000548080 SHMT2P34897 504 aa16.7■□□□□ 0.26
HDAC7-227ENST00000548080 LSSP48449 732 aa16.7■□□□□ 0.26
HDAC7-227ENST00000548080 TRA2AQ13595 282 aaKnown RBP eCLIP16.7■□□□□ 0.26
HDAC7-227ENST00000548080 KCNAB1Q14722 419 aa16.7■□□□□ 0.26
HDAC7-227ENST00000548080 RTP5Q14D33 572 aa16.7■□□□□ 0.26
HDAC7-227ENST00000548080 CAPN13Q6MZZ7 669 aaPredicted RBP16.7■□□□□ 0.26
HDAC7-227ENST00000548080 CCDC121Q6ZUS5 278 aa16.7■□□□□ 0.26
HDAC7-227ENST00000548080 LRRC56Q8IYG6 542 aaPredicted RBP16.7■□□□□ 0.26
HDAC7-227ENST00000548080 PPFIBP2Q8ND30 876 aa16.7■□□□□ 0.26
HDAC7-227ENST00000548080 ACTRT2Q8TDY3 377 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms