RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 OR5T2Q8NGG2 359 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 OR9I1Q8NGQ6 314 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 MAFIPQ8WZ33 124 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 HSH2DQ96JZ2 352 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 ABCG5Q9H222 651 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 NEUROD4Q9HD90 331 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 MAP4K5Q9Y4K4 846 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 TCRBV3S1A0A5B6 114 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 CLDN24A6NM45 220 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 SOCS2O14508 198 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 CREBL2O60519 120 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-212ENST00000546744 CLIC3O95833 236 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 PAHP00439 452 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 IFNA21P01568 189 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 HK1P19367 917 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 TCEA1P23193 301 aaKnown RBP12.45□□□□□ -0.42
PTCH1-212ENST00000546744 ASPAP45381 313 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 DSTNP60981 165 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 SREBF2Q12772 1141 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 SLC2A7Q6PXP3 512 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 MOB2Q70IA6 237 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 SPATA22Q8NHS9 363 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 TCTEX1D2Q8WW35 142 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 RAD51AP1Q96B01 352 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 ARL5BQ96KC2 179 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 SLC35G5Q96KT7 338 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 SLC32A1Q9H598 525 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 TAS2R8Q9NYW2 309 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 ERVK-18Q9QC07 812 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 P2RX2Q9UBL9 471 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 RIMKLBQ9ULI2 386 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 FZD4Q9ULV1 537 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 A0A1W2PRQ8 180 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 NAP1L6A6NFF2 107 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 ECI2O75521 394 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 SLC25A12O75746 678 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 VNN1O95497 513 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 APOC3P02656 99 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 CSF2P04141 144 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 MYCLP1P12525 358 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-212ENST00000546744 PKLRP30613 574 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 CLK3P49761 638 aaKnown RBP12.45□□□□□ -0.42
PTCH1-212ENST00000546744 BTN3A2P78410 334 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 ARF5P84085 180 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 CDK6Q00534 326 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 TAGLNQ01995 201 aaKnown RBP12.45□□□□□ -0.42
PTCH1-212ENST00000546744 GALNT2Q10471 571 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 GRSF1Q12849 480 aaKnown RBP eCLIP12.45□□□□□ -0.42
PTCH1-212ENST00000546744 MFSD10Q14728 455 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 ATXN7L2Q5T6C5 722 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-212ENST00000546744 NBPF12Q5TAG4 269 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-212ENST00000546744 ANKRD54Q6NXT1 300 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 NAPRTQ6XQN6 538 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 TMEM135Q86UB9 458 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 CLIP4Q8N3C7 705 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 IL31RAQ8NI17 732 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 PSKH2Q96QS6 385 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 POTEKPQ9BYX7 375 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 IKZF4Q9H2S9 585 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 NIPAL2Q9H841 368 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 TMPRSS4Q9NRS4 437 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 EXTL2Q9UBQ6 330 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 PCDHGB2Q9Y5G2 931 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 MAFBQ9Y5Q3 323 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-212ENST00000546744 KRBOX1C9JBD0 128 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 NFKBIEO00221 500 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 INSIG1O15503 277 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 MT-ND5P03915 603 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 ASGR1P07306 291 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 PRMT2P55345 433 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 RPP38P78345 283 aaKnown RBP12.44□□□□□ -0.42
PTCH1-212ENST00000546744 SNTA1Q13424 505 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 ZCCHC12Q6PEW1 402 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 ULK3Q6PHR2 472 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 CDHR3Q6ZTQ4 885 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 ZNF467Q7Z7K2 595 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-212ENST00000546744 COMMD7Q86VX2 200 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 ANKRD46Q86W74 232 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 SLC43A3Q8NBI5 491 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 CHDHQ8NE62 594 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-212ENST00000546744 TSEN15Q8WW01 171 aaKnown RBP12.44□□□□□ -0.42
PTCH1-212ENST00000546744 ING5Q8WYH8 240 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 S100PBPQ96BU1 408 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 NXPE2Q96DL1 559 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 CMTM7Q96FZ5 175 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 MTIF3Q9H2K0 278 aaKnown RBP12.44□□□□□ -0.42
PTCH1-212ENST00000546744 MYNNQ9NPC7 610 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTCH1-212ENST00000546744 FLRT2O43155 660 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 SH3BGRLO75368 114 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 H2AFB2P0C5Z0 115 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 PIRTP0C851 137 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 CHMP24386 653 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 ALDH3B2P48448 385 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 ZNF132P52740 706 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 CAPZA1P52907 286 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 CDH11P55287 796 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 GJA9P57773 515 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 UFM1P61960 85 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 SLC36A3Q495N2 470 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms