RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 S100A3P33764 101 aa11.52□□□□□ -0.56
CCDC38-202ENST00000546386 CYP4F3Q08477 520 aa11.52□□□□□ -0.56
CCDC38-202ENST00000546386 PRSS53Q2L4Q9 553 aa11.52□□□□□ -0.56
CCDC38-202ENST00000546386 OTUD3Q5T2D3 398 aaPredicted RBP11.52□□□□□ -0.56
CCDC38-202ENST00000546386 ENPP6Q6UWR7 440 aa11.52□□□□□ -0.56
CCDC38-202ENST00000546386 FAM129CQ86XR2 697 aa11.52□□□□□ -0.56
CCDC38-202ENST00000546386 ANKRD53Q8N9V6 530 aa11.52□□□□□ -0.56
CCDC38-202ENST00000546386 TMEM145Q8NBT3 493 aa11.52□□□□□ -0.56
CCDC38-202ENST00000546386 FAM3CQ92520 227 aa11.52□□□□□ -0.56
CCDC38-202ENST00000546386 COQ10BQ9H8M1 238 aa11.52□□□□□ -0.56
CCDC38-202ENST00000546386 CCDC177Q9NQR7 707 aaPredicted RBP11.52□□□□□ -0.56
CCDC38-202ENST00000546386 MCM8Q9UJA3 840 aa11.52□□□□□ -0.56
CCDC38-202ENST00000546386 SNX11Q9Y5W9 270 aa11.52□□□□□ -0.56
CCDC38-202ENST00000546386 SPAG17Q6Q759 2223 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 CXorf51AA0A1B0GTR3 108 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 LIN7AO14910 233 aaPredicted RBP11.52□□□□□ -0.57
CCDC38-202ENST00000546386 CASC3O15234 703 aaKnown RBP11.52□□□□□ -0.57
CCDC38-202ENST00000546386 ADH1BP00325 375 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 C9P02748 559 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 MTHFRP42898 656 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 RAE1P78406 368 aaKnown RBP11.52□□□□□ -0.57
CCDC38-202ENST00000546386 METRNLQ641Q3 311 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 GLYATQ6IB77 296 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 TLDC1Q6P9B6 456 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 ZNF852Q6ZMS4 543 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 EFL1Q7Z2Z2 1120 aaKnown RBP11.52□□□□□ -0.57
CCDC38-202ENST00000546386 TRIM73Q86UV7 250 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 L3MBTL4Q8NA19 623 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 OR56A3Q8NH54 315 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 OR1E3Q8WZA6 343 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 PANX1Q96RD7 426 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 GAS2L1Q99501 681 aaPredicted RBP11.52□□□□□ -0.57
CCDC38-202ENST00000546386 ZBTB18Q99592 522 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 APOOQ9BUR5 198 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 KLHL4Q9C0H6 718 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 MUC22E2RYF6 1773 aaPredicted RBP11.52□□□□□ -0.57
CCDC38-202ENST00000546386 CCDC88CQ9P219 2028 aa11.52□□□□□ -0.57
CCDC38-202ENST00000546386 GABRR3A8MPY1 467 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 KCNH1O95259 989 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 GABRG2P18507 467 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 UGT8Q16880 541 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 GALNT13Q8IUC8 556 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 HM13Q8TCT9 377 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 HCAR2Q8TDS4 363 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 ROPN1LQ96C74 230 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 ZIM2Q9NZV7 527 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 SPASTQ9UBP0 616 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 RIMS3Q9UJD0 308 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 DYRK1BQ9Y463 629 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 RFXANKO14593 260 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 OR1F1O43749 312 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 IL9P15248 144 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 ATP6V1C1P21283 382 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 PPM1FP49593 454 aaPredicted RBP11.51□□□□□ -0.57
CCDC38-202ENST00000546386 ATP4BP51164 291 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 RHDQ02161 417 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 SP140Q13342 867 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 UBXN2BQ14CS0 331 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 BCL7AQ4VC05 210 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 ZNF385BQ569K4 471 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 PRAMEF13Q5VWM6 474 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 TTC23LQ6PF05 361 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 MTSS1LQ765P7 747 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 PDZD3Q86UT5 571 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 HORMAD1Q86X24 394 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 MINDY1Q8N5J2 469 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 OR10G6Q8NH81 332 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 SLC5A11Q8WWX8 675 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 MAGED4Q96JG8 741 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 BMFQ96LC9 184 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 ZNF583Q96ND8 569 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 GPR174Q9BXC1 333 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 TEX101Q9BY14 249 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 CLMPQ9H6B4 373 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 SERHLQ9NQF3 203 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 RAD18Q9NS91 495 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 DLGAP2Q9P1A6 1054 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 KLF15Q9UIH9 416 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 DTNAQ9Y4J8 743 aa11.51□□□□□ -0.57
CCDC38-202ENST00000546386 DHRS12A0PJE2 317 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 ANHXE9PGG2 379 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 SOCS2O14508 198 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 PLRG1O43660 514 aaKnown RBP11.5□□□□□ -0.57
CCDC38-202ENST00000546386 VEGFDO43915 354 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 SEC24DO94855 1032 aaPredicted RBP11.5□□□□□ -0.57
CCDC38-202ENST00000546386 JAK1P23458 1154 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 ACTR1BP42025 376 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 TAS2R50P59544 299 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 ACTR1AP61163 376 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 RPS26P62854 115 aaKnown RBP11.5□□□□□ -0.57
CCDC38-202ENST00000546386 CTBSQ01459 385 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 ENPP2Q13822 863 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 GAS6Q14393 721 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 TMEM214Q6NUQ4 689 aaKnown RBP11.5□□□□□ -0.57
CCDC38-202ENST00000546386 MED27Q6P2C8 311 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 IYDQ6PHW0 289 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 OLIG3Q7RTU3 272 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 SZRD1Q7Z422 152 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 COMMD6Q7Z4G1 85 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 TMEFF1Q8IYR6 380 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms