RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	RYR1	P21817	5038 aa		6.2	□□□□□ -1.42
CIT-213	ENST00000543324	HEATR5B	Q9P2D3	2071 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	DOCK10	Q96BY6	2186 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	IGHV5-51	A0A0C4DH38	117 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324		A0A1B0GVG6	124 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	MGAT4D	A6NG13	374 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	MROH6	A6NGR9	719 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324		F5H423	210 aa	Predicted RBP	6.19	□□□□□ -1.42
CIT-213	ENST00000543324		H0Y3Z8	333 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	PROM1	O43490	865 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	BUD23	O43709	281 aa	Known RBP	6.19	□□□□□ -1.42
CIT-213	ENST00000543324	POP7	O75817	140 aa	Known RBP	6.19	□□□□□ -1.42
CIT-213	ENST00000543324	KRT36	O76013	467 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	SRP72	O76094	671 aa	Known RBP	6.19	□□□□□ -1.42
CIT-213	ENST00000543324	TIAF1	O95411	115 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	ACSL3	O95573	720 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	RECK	O95980	971 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	VIP	P01282	170 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	TYRP1	P17643	537 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	VCL	P18206	1134 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	LPO	P22079	712 aa	Predicted RBP	6.19	□□□□□ -1.42
CIT-213	ENST00000543324	GCA	P28676	217 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	CCL11	P51671	97 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	ITGA8	P53708	1063 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	EIF3E	P60228	445 aa	Known RBP	6.19	□□□□□ -1.42
CIT-213	ENST00000543324	SH3BP2	P78314	561 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	CDK16	Q00536	496 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	NFE2L1	Q14494	772 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	IL11RA	Q14626	422 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	TBCC	Q15814	346 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	ADRM1	Q16186	407 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	RPE65	Q16518	533 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	TRMT5	Q32P41	509 aa	Known RBP	6.19	□□□□□ -1.42
CIT-213	ENST00000543324	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	6.19	□□□□□ -1.42
CIT-213	ENST00000543324	MTFR2	Q6P444	385 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	KLC3	Q6P597	504 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	OTOA	Q7RTW8	1153 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	AMZ2	Q86W34	360 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	FAM129C	Q86XR2	697 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	MYLK4	Q86YV6	388 aa	Predicted RBP	6.19	□□□□□ -1.42
CIT-213	ENST00000543324	KRTAP1-3	Q8IUG1	177 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	TRAPPC5	Q8IUR0	188 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	CDKL3	Q8IVW4	592 aa	Predicted RBP	6.19	□□□□□ -1.42
CIT-213	ENST00000543324	CARF	Q8N187	725 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	SLC25A41	Q8N5S1	370 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	OR4K2	Q8NGD2	314 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	OR13C4	Q8NGS5	318 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	UHMK1	Q8TAS1	419 aa	Known RBP	6.19	□□□□□ -1.42
CIT-213	ENST00000543324	CCDC110	Q8TBZ0	833 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	BLOC1S5	Q8TDH9	187 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	NAT14	Q8WUY8	206 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	ZFPM2	Q8WW38	1151 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	STMN2	Q93045	179 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	ALKBH8	Q96BT7	664 aa	Known RBP	6.19	□□□□□ -1.42
CIT-213	ENST00000543324	FCRL4	Q96PJ5	515 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	PPP1R2P1	Q96PQ5	205 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	SMC6	Q96SB8	1091 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	CD180	Q99467	661 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	CTRC	Q99895	268 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	ECSIT	Q9BQ95	431 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	NUDT9	Q9BW91	350 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	FSD1L	Q9BXM9	530 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	VPS11	Q9H270	941 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	OR52A5	Q9H2C5	316 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	LIME1	Q9H400	295 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	KIR3DX1	Q9H7L2	352 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	TBCCD1	Q9NVR7	557 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	TRPS1	Q9UHF7	1281 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	FKBPL	Q9UIM3	349 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	BLOC1S6	Q9UL45	172 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	BTRC	Q9Y297	605 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	DNAJC16	Q9Y2G8	782 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	R3HDM2	Q9Y2K5	976 aa	Known RBP	6.19	□□□□□ -1.42
CIT-213	ENST00000543324	MTO1	Q9Y2Z2	717 aa	Known RBP	6.19	□□□□□ -1.42
CIT-213	ENST00000543324	AAR2	Q9Y312	384 aa	Known RBP	6.19	□□□□□ -1.42
CIT-213	ENST00000543324	PKP3	Q9Y446	797 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	PCDHGA10	Q9Y5H3	936 aa		6.19	□□□□□ -1.42
CIT-213	ENST00000543324	HRNR	Q86YZ3	2850 aa	Predicted RBP	6.19	□□□□□ -1.42
CIT-213	ENST00000543324	C17orf113	A0A1B0GUU1	675 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	TCRBV7S2A1N4T	A0A589	114 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	OR5K3	A6NET4	321 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	OR2AG2	A6NM03	316 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324		A8MU76	341 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	PDZK1P1	A8MUH7	402 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324		H3BMH7	237 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324		H7C0C1	242 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	POLR1C	O15160	346 aa	Predicted RBP	6.18	□□□□□ -1.42
CIT-213	ENST00000543324	TM9SF1	O15321	606 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	STX7	O15400	261 aa	Known RBP	6.18	□□□□□ -1.42
CIT-213	ENST00000543324	METTL18	O95568	372 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	IDO1	P14902	403 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	FOLR1	P15328	257 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	DNASE1	P24855	282 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	ACRV1	P26436	265 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	DLST	P36957	453 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	ATP5O	P48047	213 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	GDF10	P55107	478 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	AP2B1	P63010	937 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	PDE1B	Q01064	536 aa		6.18	□□□□□ -1.42
CIT-213	ENST00000543324	ACVR1	Q04771	509 aa		6.18	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms