RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 ALPK1Q96QP1 1244 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 SEZ6LQ9BYH1 1024 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 SCML2Q9UQR0 700 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 FAM170BA6NMN3 283 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 C7P10643 843 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 SERINC3Q13530 473 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 IGDCC3Q8IVU1 814 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 NPAS3Q8IXF0 933 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 OR2AP1Q8NGE2 309 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 MMP27Q9H306 513 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 DPEP2Q9H4A9 486 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 BRD7Q9NPI1 651 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 TTC24A2A3L6 582 aaPredicted RBP12.75□□□□□ -0.37
TNC-212ENST00000542877 KCNE1P15382 129 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 EDNRAP25101 427 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 SP140Q13342 867 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 MOGSQ13724 837 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 ATP6AP1Q15904 470 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 ABHD13Q7L211 337 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 ZNF627Q7L945 461 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 SYVN1Q86TM6 617 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 CENPSQ8N2Z9 138 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 TMEM145Q8NBT3 493 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 FAM46DQ8NEK8 389 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 ISOC1Q96CN7 298 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 FRMD6Q96NE9 622 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 SCGB3A2Q96PL1 93 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 ABCG4Q9H172 646 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 ZNF304Q9HCX3 659 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 HCN4Q9Y3Q4 1203 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 CMAHPQ9Y471 501 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 PCDHGA3Q9Y5H0 932 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 AFDNP55196 1824 aaKnown RBP12.75□□□□□ -0.37
TNC-212ENST00000542877 HOXD13P35453 343 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 ACVRL1P37023 503 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 CEBPGP53567 150 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 LRRC73Q5JTD7 316 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 KREMEN2Q8NCW0 462 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 PLEKHO2Q8TD55 490 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 SEC14L1Q92503 715 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 COQ8BQ96D53 544 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 UCKL1Q9NWZ5 548 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 MKS1Q9NXB0 559 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 IL36AQ9UHA7 158 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 ZNF45Q02386 682 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 ARHGAP1Q07960 439 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 CBFBQ13951 182 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 CEACAM20Q6UY09 585 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 SLC45A3Q96JT2 553 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 LIN28AQ9H9Z2 209 aaKnown RBP12.75□□□□□ -0.37
TNC-212ENST00000542877 STYXL1Q9Y6J8 313 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 DLGAP1O14490 977 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 XPNPEP2O43895 674 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 ZNF30P17039 623 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 STOMP27105 288 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 SEMG2Q02383 582 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 SPERTQ8NA61 448 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 SLC37A3Q8NCC5 494 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 YIPF4Q9BSR8 244 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 VIPR1P32241 457 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 CDH11P55287 796 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 EIF5AL1Q6IS14 154 aaKnown RBP12.74□□□□□ -0.37
TNC-212ENST00000542877 TREML1Q86YW5 311 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 GAL3ST1Q99999 423 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 CD244Q9BZW8 370 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 BTBD1Q9H0C5 482 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 MINDY3Q9H8M7 445 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 CACNG4Q9UBN1 327 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 RGS17Q9UGC6 210 aaPredicted RBP12.74□□□□□ -0.37
TNC-212ENST00000542877 FER1L4A9Z1Z3 1794 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 CHRM1P11229 460 aaPredicted RBP12.74□□□□□ -0.37
TNC-212ENST00000542877 IFI30P13284 250 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 ZNF20P17024 532 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 PROZP22891 400 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 CLCN2P51788 898 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 PGDP52209 483 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 GPR68Q15743 365 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 FAM189A2Q15884 450 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 SMYD5Q6GMV2 418 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 FBXO15Q8NCQ5 510 aaPredicted RBP12.74□□□□□ -0.37
TNC-212ENST00000542877 OR8J3Q8NGG0 315 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 SMPDL3AQ92484 453 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 KCNJ9Q92806 393 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 PEBP4Q96S96 227 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 TMED9Q9BVK6 235 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 TRPV4Q9HBA0 871 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 MGAT4BQ9UQ53 548 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 PSAT1Q9Y617 370 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 VIRMAQ69YN4 1812 aaKnown RBP12.74□□□□□ -0.37
TNC-212ENST00000542877 ISPDA4D126 451 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 RHPN2P1A8MT19 583 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 TMEM150CB9EJG8 249 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 PPEF2O14830 753 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 SLC31A1O15431 190 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 KDELR3O43731 214 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 TLX2O43763 284 aaPredicted RBP12.74□□□□□ -0.37
TNC-212ENST00000542877 EPOP01588 193 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 PRKCGP05129 697 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 PRKACGP22612 351 aa12.74□□□□□ -0.37
TNC-212ENST00000542877 ZNF280AP59817 542 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms