RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 TUBB6Q9BUF5 446 aa16.52■□□□□ 0.24
PPP1CA-210ENST00000542876 RNF32Q9H0A6 362 aa16.52■□□□□ 0.24
PPP1CA-210ENST00000542876 TRGV8A0A0C4DH27 118 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 TCRBV7S3A2A0A539 114 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 MAGEB16A2A368 324 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 E7ENX8 843 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 HAT1O14929 419 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 FOXS1O43638 330 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 AVILO75366 819 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 ITGAMP11215 1152 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 ENO3P13929 434 aaPredicted RBP16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 VPS41P49754 854 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 CLCN7P51798 805 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 TDGF1P3P51864 188 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 TAP2Q03519 686 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 DHX34Q14147 1143 aaKnown RBP16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 PCOLCEQ15113 449 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 TRIP13Q15645 432 aaPredicted RBP16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 SYT16Q17RD7 645 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 MFSD4BQ5TF39 518 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 TMEM207Q6UWW9 146 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 CENPUQ71F23 418 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 ZC3H7AQ8IWR0 971 aaKnown RBP16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 FBXO15Q8NCQ5 510 aaPredicted RBP16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 DNAJB8Q8NHS0 232 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 STMN3Q9NZ72 180 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 KLHL42Q9P2K6 505 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 C19orf25Q9UFG5 118 aaPredicted RBP16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 ABCA12Q86UK0 2595 aa16.51■□□□□ 0.23
PPP1CA-210ENST00000542876 OR5H15A6NDH6 313 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 H7BY64 318 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 CEP104O60308 925 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 UNC5CO95185 931 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 CELA2AP08217 269 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 MPC1LP0DKB6 136 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 HRH2P25021 359 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 MAT1AQ00266 395 aaKnown RBP16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 RBPJQ06330 500 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 ZNF33BQ06732 778 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 GPS1Q13098 491 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 CUL1Q13616 776 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 MINDY4Q4G0A6 757 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 MTFR2Q6P444 385 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 TMEM205Q6UW68 189 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 PLD3Q8IV08 490 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 PRELID2Q8N945 189 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 ASB11Q8WXH4 323 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 KCNJ9Q92806 393 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 ZNF669Q96BR6 464 aaPredicted RBP16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 PRAP1Q96NZ9 151 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 SYNPO2LQ9H987 977 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 LZTFL1Q9NQ48 299 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 ABI3Q9P2A4 366 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 SEC14L3Q9UDX4 400 aa16.5■□□□□ 0.23
PPP1CA-210ENST00000542876 FAM237BA0A1B0GVD1 139 aa16.49■□□□□ 0.23
PPP1CA-210ENST00000542876 A8MUI8 341 aa16.49■□□□□ 0.23
PPP1CA-210ENST00000542876 H0YIG0 161 aa16.49■□□□□ 0.23
PPP1CA-210ENST00000542876 P2RX6O15547 441 aa16.49■□□□□ 0.23
PPP1CA-210ENST00000542876 PRAMEF2O60811 474 aa16.49■□□□□ 0.23
PPP1CA-210ENST00000542876 CYC1P08574 325 aa16.49■□□□□ 0.23
PPP1CA-210ENST00000542876 CASP6P55212 293 aa16.49■□□□□ 0.23
PPP1CA-210ENST00000542876 ARHGEF39Q8N4T4 335 aa16.49■□□□□ 0.23
PPP1CA-210ENST00000542876 OR9A4Q8NGU2 314 aa16.49■□□□□ 0.23
PPP1CA-210ENST00000542876 IMMP1LQ96LU5 166 aa16.49■□□□□ 0.23
PPP1CA-210ENST00000542876 SLC30A3Q99726 388 aa16.49■□□□□ 0.23
PPP1CA-210ENST00000542876 CCDC177Q9NQR7 707 aaPredicted RBP16.49■□□□□ 0.23
PPP1CA-210ENST00000542876 FBXO6Q9NRD1 293 aaPredicted RBP16.49■□□□□ 0.23
PPP1CA-210ENST00000542876 TMEM184CQ9NVA4 438 aa16.49■□□□□ 0.23
PPP1CA-210ENST00000542876 COMMD10Q9Y6G5 202 aa16.49■□□□□ 0.23
PPP1CA-210ENST00000542876 LRBAP50851 2863 aa16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 CROCCQ5TZA2 2017 aa16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 ZGRF1Q86YA3 2104 aa16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 SDR42E2A6NKP2 422 aa16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 SEC24DO94855 1032 aaPredicted RBP16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 NSA2O95478 260 aaKnown RBP16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 MLNP12872 115 aa16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 RPS15AP62244 130 aaKnown RBP16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 CTBP1Q13363 440 aa16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 ART3Q13508 389 aa16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 BTBD16Q32M84 506 aa16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 UBE2R2Q712K3 238 aaPredicted RBP16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 CPEB2Q7Z5Q1 589 aaKnown RBP16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 DENND6AQ8IWF6 608 aa16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 TRIM58Q8NG06 486 aa16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 GIMAP7Q8NHV1 300 aa16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 CALML6Q8TD86 181 aa16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 ZNF354BQ96LW1 612 aa16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 CYTH2Q99418 400 aa16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 VN1R1Q9GZP7 353 aa16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 PCBD2Q9H0N5 130 aa16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 XAB2Q9HCS7 855 aaKnown RBP16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 DHRS7Q9Y394 339 aa16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 KLF2Q9Y5W3 355 aaPredicted RBP16.48■□□□□ 0.23
PPP1CA-210ENST00000542876 KCNE1BA0A087WTH5 132 aa16.47■□□□□ 0.23
PPP1CA-210ENST00000542876 GFYI3L273 518 aa16.47■□□□□ 0.23
PPP1CA-210ENST00000542876 CCL21O00585 134 aa16.47■□□□□ 0.23
PPP1CA-210ENST00000542876 KIF5CO60282 957 aa16.47■□□□□ 0.23
PPP1CA-210ENST00000542876 KRT14P02533 472 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms