RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 GCNT7Q6ZNI0 430 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 CLEC4FQ8N1N0 589 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 PPWD1Q96BP3 646 aaKnown RBP16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 WDR34Q96EX3 536 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 SLC29A1Q99808 456 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 DMRT3Q9NQL9 472 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 CCM2LQ9NUG4 571 aaPredicted RBP16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 H7BY64 318 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 SCN2BO60939 215 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 PIM1P11309 404 aaPredicted RBP16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 ACADMP11310 421 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 AK4P27144 223 aaPredicted RBP16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 NRF1Q16656 503 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 RUNDC3AQ59EK9 446 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 GLYATQ6IB77 296 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 GALNT13Q8IUC8 556 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 LAS2Q8IYD9 372 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 FAM86B1Q8N7N1 296 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 TSACCQ96A04 125 aaPredicted RBP16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 TESCQ96BS2 214 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 BIRC7Q96CA5 298 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 PRAP1Q96NZ9 151 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 SEPHS2Q99611 448 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 CARS2Q9HA77 564 aaKnown RBP16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 BRF2Q9HAW0 419 aa16.6■□□□□ 0.25
TMEM50B-210ENST00000542230 GABRR3A8MPY1 467 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 PI15O43692 258 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 UBTFL6P0CB48 400 aaPredicted RBP16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 ERGP11308 486 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 HOXB9P17482 250 aaPredicted RBP16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 MC1RQ01726 317 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 RBBP5Q15291 538 aaKnown RBP16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 CMPK2Q5EBM0 449 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 TBCELQ5QJ74 424 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 FAM180BQ6P0A1 224 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 FAM129CQ86XR2 697 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 MMP21Q8N119 569 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 ANKRD53Q8N9V6 530 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 OR1E3Q8WZA6 343 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 SH3KBP1Q96B97 665 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 DUS3LQ96G46 650 aaKnown RBP16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 BMFQ96LC9 184 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 MAGEB10Q96LZ2 347 aaPredicted RBP16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 CIB1Q99828 191 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 TRIT1Q9H3H1 467 aaKnown RBP16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 COQ10BQ9H8M1 238 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 RUVBL1Q9Y265 456 aaKnown RBP16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 SDK1Q7Z5N4 2213 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 GNG14A0A1W2PPG7 69 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 PRR19A6NJB7 356 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 AQP12BA6NM10 295 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 PDZK1P1A8MUH7 402 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 MBTPS2O43462 519 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 STATHP02808 62 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 COX7A2P14406 83 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 TEAD1P28347 426 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 MAPK1P28482 360 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 HTR1EP28566 365 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 KIR3DL1P43629 444 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 MRPS21P82921 87 aaKnown RBP16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 COL9A2Q14055 689 aaPredicted RBP16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 COMMD6Q7Z4G1 85 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 GPR180Q86V85 440 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 AQP12AQ8IXF9 295 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 ICA1LQ8NDH6 482 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 OR8J3Q8NGG0 315 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 EFCAB11Q9BUY7 163 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 TRPV5Q9NQA5 729 aa16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 DNMT3AQ9Y6K1 912 aaPredicted RBP16.59■□□□□ 0.25
TMEM50B-210ENST00000542230 TRBV23OR9-2A0A075B6M9 112 aa16.58■□□□□ 0.25
TMEM50B-210ENST00000542230 STAMBPO95630 424 aa16.58■□□□□ 0.25
TMEM50B-210ENST00000542230 ZNF26P17031 533 aaPredicted RBP16.58■□□□□ 0.25
TMEM50B-210ENST00000542230 PRPS1L1P21108 318 aa16.58■□□□□ 0.25
TMEM50B-210ENST00000542230 CCR3P51677 355 aa16.58■□□□□ 0.25
TMEM50B-210ENST00000542230 CLNS1AP54105 237 aaKnown RBP16.58■□□□□ 0.25
TMEM50B-210ENST00000542230 GK3PQ14409 553 aa16.58■□□□□ 0.25
TMEM50B-210ENST00000542230 FXNQ16595 210 aa16.58■□□□□ 0.25
TMEM50B-210ENST00000542230 ENPP7Q6UWV6 458 aa16.58■□□□□ 0.25
TMEM50B-210ENST00000542230 FAM3CQ92520 227 aa16.58■□□□□ 0.25
TMEM50B-210ENST00000542230 FIG4Q92562 907 aa16.58■□□□□ 0.25
TMEM50B-210ENST00000542230 CENPKQ9BS16 269 aa16.58■□□□□ 0.25
TMEM50B-210ENST00000542230 C8orf33Q9H7E9 229 aaPredicted RBP16.58■□□□□ 0.25
TMEM50B-210ENST00000542230 PREBQ9HCU5 417 aa16.58■□□□□ 0.25
TMEM50B-210ENST00000542230 ACSL5Q9ULC5 683 aa16.58■□□□□ 0.25
TMEM50B-210ENST00000542230 PCDHB3Q9Y5E6 796 aa16.58■□□□□ 0.25
TMEM50B-210ENST00000542230 ARHGEF17Q96PE2 2063 aaPredicted RBP16.58■□□□□ 0.25
TMEM50B-210ENST00000542230 PLXND1Q9Y4D7 1925 aa16.58■□□□□ 0.24
TMEM50B-210ENST00000542230 C15orf38-AP3S2A0A0A6YYH1 394 aa16.58■□□□□ 0.24
TMEM50B-210ENST00000542230 PRSS38A1L453 326 aa16.58■□□□□ 0.24
TMEM50B-210ENST00000542230 CACNB4O00305 520 aaPredicted RBP16.58■□□□□ 0.24
TMEM50B-210ENST00000542230 RTCAO00442 366 aaKnown RBP16.58■□□□□ 0.24
TMEM50B-210ENST00000542230 PEX1O43933 1283 aa16.58■□□□□ 0.24
TMEM50B-210ENST00000542230 PCDH7O60245 1069 aa16.58■□□□□ 0.24
TMEM50B-210ENST00000542230 CAPNS1P04632 268 aa16.58■□□□□ 0.24
TMEM50B-210ENST00000542230 HOXB3P14651 431 aaPredicted RBP16.58■□□□□ 0.24
TMEM50B-210ENST00000542230 DMPKQ09013 629 aa16.58■□□□□ 0.24
TMEM50B-210ENST00000542230 CYP2A13Q16696 494 aa16.58■□□□□ 0.24
TMEM50B-210ENST00000542230 PRSS53Q2L4Q9 553 aa16.58■□□□□ 0.24
TMEM50B-210ENST00000542230 LCTLQ6UWM7 567 aa16.58■□□□□ 0.24
TMEM50B-210ENST00000542230 TMIGD1Q6UXZ0 262 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms