RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 ALDH1A1P00352 501 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 CHRM5P08912 532 aaPredicted RBP14.84□□□□□ -0.03
CNOT9-208ENST00000542068 ACPPP15309 386 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 BPIP17213 487 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 AZGP1P25311 298 aaKnown RBP14.84□□□□□ -0.03
CNOT9-208ENST00000542068 RRM2P31350 389 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 DNAJA1P31689 397 aaKnown RBP14.84□□□□□ -0.03
CNOT9-208ENST00000542068 S100A5P33763 92 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 EIF2DP41214 584 aaKnown RBP14.84□□□□□ -0.03
CNOT9-208ENST00000542068 NRIP1P48552 1158 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 CAMK2GQ13555 558 aaPredicted RBP14.84□□□□□ -0.03
CNOT9-208ENST00000542068 CACUL1Q86Y37 369 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 GPR156Q8NFN8 814 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 ATL1Q8WXF7 558 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 SCAMP4Q969E2 229 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 FATE1Q969F0 183 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 MED8Q96G25 268 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 BTBD2Q9BX70 525 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 KCNH6Q9H252 994 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 ZNF334Q9HCZ1 680 aaPredicted RBP14.84□□□□□ -0.03
CNOT9-208ENST00000542068 THG1LQ9NWX6 298 aaKnown RBP14.84□□□□□ -0.03
CNOT9-208ENST00000542068 KDELR2P33947 212 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 HMGCLP35914 325 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 TM4SF4P48230 202 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 CLCN4P51793 760 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 COL9A2Q14055 689 aaPredicted RBP14.84□□□□□ -0.03
CNOT9-208ENST00000542068 GPNMBQ14956 572 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.84□□□□□ -0.03
CNOT9-208ENST00000542068 SNX20Q7Z614 316 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 ENTHD1Q8IYW4 607 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 OR8H2Q8N162 312 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 STK40Q8N2I9 435 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 HJURPQ8NCD3 748 aaPredicted RBP14.84□□□□□ -0.03
CNOT9-208ENST00000542068 SH3KBP1Q96B97 665 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 PLD4Q96BZ4 506 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 GPBP1L1Q9HC44 474 aaPredicted RBP14.84□□□□□ -0.03
CNOT9-208ENST00000542068 IL1RAPQ9NPH3 570 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 ERVK13-1Q9NX77 482 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 QPCTLQ9NXS2 382 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 LHX3Q9UBR4 397 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 OGDHLQ9ULD0 1010 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 TLL1O43897 1013 aa14.83□□□□□ -0.03
CNOT9-208ENST00000542068 UPK1BO75841 260 aa14.83□□□□□ -0.03
CNOT9-208ENST00000542068 ZDHHC11BP0C7U3 371 aa14.83□□□□□ -0.03
CNOT9-208ENST00000542068 CST5P28325 142 aaPredicted RBP14.83□□□□□ -0.03
CNOT9-208ENST00000542068 SLC19A1P41440 591 aa14.83□□□□□ -0.03
CNOT9-208ENST00000542068 MRPL19P49406 292 aaKnown RBP14.83□□□□□ -0.03
CNOT9-208ENST00000542068 ABHD18Q0P651 414 aa14.83□□□□□ -0.03
CNOT9-208ENST00000542068 ABRQ12979 859 aa14.83□□□□□ -0.03
CNOT9-208ENST00000542068 STX19Q8N4C7 294 aa14.83□□□□□ -0.03
CNOT9-208ENST00000542068 SORCS1Q8WY21 1168 aa14.83□□□□□ -0.03
CNOT9-208ENST00000542068 FOXJ1Q92949 421 aa14.83□□□□□ -0.03
CNOT9-208ENST00000542068 CENPOQ9BU64 300 aa14.83□□□□□ -0.03
CNOT9-208ENST00000542068 ITPAQ9BY32 194 aa14.83□□□□□ -0.03
CNOT9-208ENST00000542068 MRPL17Q9NRX2 175 aaKnown RBP14.83□□□□□ -0.03
CNOT9-208ENST00000542068 CREBZFQ9NS37 354 aa14.83□□□□□ -0.03
CNOT9-208ENST00000542068 SLC6A14Q9UN76 642 aa14.83□□□□□ -0.03
CNOT9-208ENST00000542068 SNX6Q9UNH7 406 aa14.83□□□□□ -0.03
CNOT9-208ENST00000542068 OARD1Q9Y530 152 aa14.83□□□□□ -0.03
CNOT9-208ENST00000542068 NPIPB15A6NHN6 443 aaPredicted RBP14.83□□□□□ -0.04
CNOT9-208ENST00000542068 HOXA2O43364 376 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 RFPL2O75678 378 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 EPN2O95208 641 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 CCNDBP1O95273 360 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 F11P03951 625 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 GBAP04062 536 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 ACRP10323 421 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 ITGAMP11215 1152 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 FPR1P21462 350 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 XPAP23025 273 aaPredicted RBP14.83□□□□□ -0.04
CNOT9-208ENST00000542068 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.83□□□□□ -0.04
CNOT9-208ENST00000542068 LRRC66Q68CR7 880 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 KDM4DQ6B0I6 523 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 TP63Q9H3D4 680 aaPredicted RBP14.83□□□□□ -0.04
CNOT9-208ENST00000542068 TM9SF3Q9HD45 589 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 FBXO8Q9NRD0 319 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 TMEM184CQ9NVA4 438 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 RLIMQ9NVW2 624 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 NAALAD2Q9Y3Q0 740 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 NEDD8-MDP1E9PL57 170 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 ANXA5P08758 320 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 TGFBR2P37173 567 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 GJA8P48165 433 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 MED22Q15528 200 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 PTCHD3Q3KNS1 767 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 UAP1L1Q3KQV9 507 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 ZNF697Q5TEC3 545 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 ADNP2Q6IQ32 1131 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 CCBE1Q6UXH8 406 aaPredicted RBP14.83□□□□□ -0.04
CNOT9-208ENST00000542068 Q6ZVU0 165 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 UBE2R2Q712K3 238 aaPredicted RBP14.83□□□□□ -0.04
CNOT9-208ENST00000542068 FAM217AQ8IXS0 508 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 PHF10Q8WUB8 498 aaKnown RBP14.83□□□□□ -0.04
CNOT9-208ENST00000542068 SLC38A4Q969I6 547 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 GTPBP3Q969Y2 492 aaKnown RBP14.83□□□□□ -0.04
CNOT9-208ENST00000542068 VN1R3Q9BXE9 311 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 MBD1Q9UIS9 605 aaPredicted RBP14.83□□□□□ -0.04
CNOT9-208ENST00000542068 RIMKLBQ9ULI2 386 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 ERVK-11Q9UQG0 969 aa14.83□□□□□ -0.04
CNOT9-208ENST00000542068 BOLA1Q9Y3E2 137 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms