RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 KLHDC8AQ8IYD2 350 aa16.1■□□□□ 0.17
CD9-209ENST00000540891 OR4K1Q8NGD4 311 aa16.1■□□□□ 0.17
CD9-209ENST00000540891 APOBEC4Q8WW27 367 aaKnown RBP16.1■□□□□ 0.17
CD9-209ENST00000540891 SLC44A1Q8WWI5 657 aa16.1■□□□□ 0.17
CD9-209ENST00000540891 NEIL2Q969S2 332 aa16.1■□□□□ 0.17
CD9-209ENST00000540891 RERGQ96A58 199 aaPredicted RBP16.1■□□□□ 0.17
CD9-209ENST00000540891 KIAA1191Q96A73 305 aa16.1■□□□□ 0.17
CD9-209ENST00000540891 EGFL8Q99944 293 aa16.1■□□□□ 0.17
CD9-209ENST00000540891 TMEM79Q9BSE2 394 aa16.1■□□□□ 0.17
CD9-209ENST00000540891 SPNS1Q9H2V7 528 aa16.1■□□□□ 0.17
CD9-209ENST00000540891 IGSF5Q9NSI5 407 aa16.1■□□□□ 0.17
CD9-209ENST00000540891 SLC22A14Q9Y267 594 aa16.1■□□□□ 0.17
CD9-209ENST00000540891 MAU2Q9Y6X3 613 aa16.1■□□□□ 0.17
CD9-209ENST00000540891 ATRXP46100 2492 aa16.1■□□□□ 0.17
CD9-209ENST00000540891 MDC1Q14676 2089 aaKnown RBP16.09■□□□□ 0.17
CD9-209ENST00000540891 NCF1BA6NI72 391 aaPredicted RBP16.09■□□□□ 0.17
CD9-209ENST00000540891 NCF1CA8MVU1 366 aaPredicted RBP16.09■□□□□ 0.17
CD9-209ENST00000540891 TAPBPO15533 448 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 FOXS1O43638 330 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 ALDOAP04075 364 aaKnown RBP16.09■□□□□ 0.17
CD9-209ENST00000540891 UMODP07911 640 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 FAM153BP0C7A2 387 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 NCF1P14598 390 aaPredicted RBP16.09■□□□□ 0.17
CD9-209ENST00000540891 CRABP2P29373 138 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 GDF5P43026 501 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 HNMTP50135 292 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 RPS15AP62244 130 aaKnown RBP16.09■□□□□ 0.17
CD9-209ENST00000540891 MEF2AQ02078 507 aaPredicted RBP16.09■□□□□ 0.17
CD9-209ENST00000540891 UAP1Q16222 522 aaPredicted RBP16.09■□□□□ 0.17
CD9-209ENST00000540891 MUM1Q2TAK8 710 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 FAM153CQ494X1 144 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 RAPH1Q70E73 1250 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 ISCA2Q86U28 154 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 CENPLQ8N0S6 344 aaPredicted RBP16.09■□□□□ 0.17
CD9-209ENST00000540891 UHMK1Q8TAS1 419 aaKnown RBP16.09■□□□□ 0.17
CD9-209ENST00000540891 SLC5A11Q8WWX8 675 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 THAP4Q8WY91 577 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 FKBP10Q96AY3 582 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 TM4SF19Q96DZ7 209 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 CABS1Q96KC9 395 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 SPSB2Q99619 263 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 MACROD1Q9BQ69 325 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 SARGQ9BW04 601 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 TXLNGYQ9BZA5 131 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 SLC26A1Q9H2B4 701 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 SNX15Q9NRS6 342 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 GEMIN8Q9NWZ8 242 aaKnown RBP16.09■□□□□ 0.17
CD9-209ENST00000540891 CTSFQ9UBX1 484 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 GPN3Q9UHW5 284 aaPredicted RBP16.09■□□□□ 0.17
CD9-209ENST00000540891 MAN2B2Q9Y2E5 1009 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 PADI2Q9Y2J8 665 aa16.09■□□□□ 0.17
CD9-209ENST00000540891 MRPS2Q9Y399 296 aaKnown RBP16.09■□□□□ 0.17
CD9-209ENST00000540891 PTRH2Q9Y3E5 179 aaKnown RBP16.09■□□□□ 0.17
CD9-209ENST00000540891 ALBP02768 609 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 C2P06681 752 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 SLC26A3P40879 764 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 CCR8P51685 355 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 PMS2P54278 862 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 IRF9Q00978 393 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 KCNAB2Q13303 367 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 NKG7Q16617 165 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 GARNL3Q5VVW2 1013 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 CPZQ66K79 652 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 PRMT9Q6P2P2 845 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 GPSM1Q86YR5 675 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 ZNF843Q8N446 348 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 MFSD9Q8NBP5 474 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 ZNF740Q8NDX6 193 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 OR2Y1Q8NGV0 311 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 NXNL1Q96CM4 212 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 THAP11Q96EK4 314 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 TSNARE1Q96NA8 513 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 ATOH8Q96SQ7 321 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 PAFAH2Q99487 392 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 TRIM55Q9BYV6 548 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 ADNPQ9H2P0 1102 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 ZNF304Q9HCX3 659 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 BSNQ9UPA5 3926 aa16.08■□□□□ 0.16
CD9-209ENST00000540891 A0A087WUV0 522 aaPredicted RBP16.07■□□□□ 0.16
CD9-209ENST00000540891 VSTM2BA6NLU5 285 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 EIF4E1BA6NMX2 242 aaKnown RBP16.07■□□□□ 0.16
CD9-209ENST00000540891 DNAJB5O75953 348 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 CD63P08962 238 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 LTA4HP09960 611 aaKnown RBP16.07■□□□□ 0.16
CD9-209ENST00000540891 PIM1P11309 404 aaPredicted RBP16.07■□□□□ 0.16
CD9-209ENST00000540891 TFEBP19484 476 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 GGT5P36269 586 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 FOLR3P41439 243 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 MAGEA12P43365 314 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 CHAF1BQ13112 559 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 SSPNQ14714 243 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 FBXO48Q5FWF7 155 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 CDKL4Q5MAI5 379 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 TBC1D1Q86TI0 1168 aaPredicted RBP16.07■□□□□ 0.16
CD9-209ENST00000540891 APLFQ8IW19 511 aaPredicted RBP16.07■□□□□ 0.16
CD9-209ENST00000540891 GSPT2Q8IYD1 628 aaKnown RBP16.07■□□□□ 0.16
CD9-209ENST00000540891 PDPRQ8NCN5 879 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 DCAKDQ8WVC6 231 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 KCTD4Q8WVF5 259 aa16.07■□□□□ 0.16
CD9-209ENST00000540891 ISL2Q96A47 359 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms