RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 GABRR3A8MPY1 467 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 ZNF701M0R085 212 aaPredicted RBP11.13□□□□□ -0.63
C11orf54-214ENST00000540113 RECQL5O94762 991 aaPredicted RBP11.13□□□□□ -0.63
C11orf54-214ENST00000540113 FGF19O95750 216 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 CEBPBP17676 345 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 POLR2EP19388 210 aaKnown RBP11.13□□□□□ -0.63
C11orf54-214ENST00000540113 CCNA2P20248 432 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 TNFRSF1BP20333 461 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 BMPR1AP36894 532 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 MAP2K4P45985 399 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 GSSP48637 474 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 DCDC1P59894 354 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 RAE1P78406 368 aaKnown RBP11.13□□□□□ -0.63
C11orf54-214ENST00000540113 ACSM2AQ08AH3 577 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 CAMK1Q14012 370 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 ACOX1Q15067 660 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 SKIV2LQ15477 1246 aaKnown RBP11.13□□□□□ -0.63
C11orf54-214ENST00000540113 VMACQ2NL98 169 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 TCEAL5Q5H9L2 206 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 HENMT1Q5T8I9 393 aaKnown RBP11.13□□□□□ -0.63
C11orf54-214ENST00000540113 ZNF691Q5VV52 312 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 ACSM2BQ68CK6 577 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 GRASPQ7Z6J2 395 aaPredicted RBP11.13□□□□□ -0.63
C11orf54-214ENST00000540113 HSH2DQ96JZ2 352 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 PKP4Q99569 1192 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 NRTNQ99748 197 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 MAGIXQ9H6Y5 334 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 ERVK-18Q9QC07 812 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 C3orf18Q9UK00 162 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 ZNF451Q9Y4E5 1061 aa11.13□□□□□ -0.63
C11orf54-214ENST00000540113 UNC80Q8N2C7 3258 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 CFAP99D6REC4 459 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 NOL3O60936 208 aaKnown RBP11.12□□□□□ -0.63
C11orf54-214ENST00000540113 EPN2O95208 641 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 CCNDBP1O95273 360 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 FGBP02675 491 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 CYP2A6P11509 494 aaPredicted RBP11.12□□□□□ -0.63
C11orf54-214ENST00000540113 SYN1P17600 705 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 PRPS1L1P21108 318 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 XPAP23025 273 aaPredicted RBP11.12□□□□□ -0.63
C11orf54-214ENST00000540113 PRPH2P23942 346 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 HTR1BP28222 390 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 CLK3P49761 638 aaKnown RBP11.12□□□□□ -0.63
C11orf54-214ENST00000540113 CDK5R2Q13319 367 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 SP140Q13342 867 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 PPIGQ13427 754 aaKnown RBP eCLIP11.12□□□□□ -0.63
C11orf54-214ENST00000540113 AQP6Q13520 282 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 SPCS2Q15005 226 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 CYP27C1Q4G0S4 372 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 CATSPEREQ5SY80 951 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 FAM180BQ6P0A1 224 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 TTC23LQ6PF05 361 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 TMEM220Q6QAJ8 160 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 ANGPTL8Q6UXH0 198 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 PIWIL3Q7Z3Z3 882 aaKnown RBP11.12□□□□□ -0.63
C11orf54-214ENST00000540113 C2orf73Q8N5S3 287 aaPredicted RBP11.12□□□□□ -0.63
C11orf54-214ENST00000540113 DDHD1Q8NEL9 900 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 TMEM159Q96B96 161 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 FUNDC2Q9BWH2 189 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 TMEM121BQ9BXQ6 578 aaPredicted RBP11.12□□□□□ -0.63
C11orf54-214ENST00000540113 PLGRKTQ9HBL7 147 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 SIRT5Q9NXA8 310 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 PDP1Q9P0J1 537 aaPredicted RBP11.12□□□□□ -0.63
C11orf54-214ENST00000540113 TBC1D14Q9P2M4 693 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 LRRK1Q38SD2 2015 aa11.12□□□□□ -0.63
C11orf54-214ENST00000540113 K7ESM1 405 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 SLCO2B1O94956 709 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 ARHGEF15O94989 841 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 OPN1SWP03999 348 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 GSTM1P09488 218 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 ANXA4P09525 319 aaPredicted RBP11.11□□□□□ -0.63
C11orf54-214ENST00000540113 ACPPP15309 386 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 JUNBP17275 347 aaPredicted RBP11.11□□□□□ -0.63
C11orf54-214ENST00000540113 GSTM2P28161 218 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 IMPA1P29218 277 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 ALDH4A1P30038 563 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 KDELR2P33947 212 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 TTKP33981 857 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 AP1S2P56377 157 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 RPS13P62277 151 aaKnown RBP11.11□□□□□ -0.63
C11orf54-214ENST00000540113 LSM3P62310 102 aaKnown RBP11.11□□□□□ -0.63
C11orf54-214ENST00000540113 GSTM4Q03013 218 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 MTAPQ13126 283 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 GAB1Q13480 694 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.11□□□□□ -0.63
C11orf54-214ENST00000540113 GTF2IRD2BQ6EKJ0 949 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 OR2T5Q6IEZ7 315 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 DUS1LQ6P1R4 473 aaKnown RBP11.11□□□□□ -0.63
C11orf54-214ENST00000540113 ZNF852Q6ZMS4 543 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 Q6ZPB1 254 aaPredicted RBP11.11□□□□□ -0.63
C11orf54-214ENST00000540113 TECPR1Q7Z6L1 1165 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 GTF2IRD2Q86UP8 949 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 C12orf40Q86WS4 652 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 OR52E4Q8NGH9 312 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 OR2T29Q8NH02 315 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 MIPOL1Q8TD10 442 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 CSGALNACT1Q8TDX6 532 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 NEIL2Q969S2 332 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 RSPRY1Q96DX4 576 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 HHIPQ96QV1 700 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms