RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 OR2A5Q96R48 311 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 MRPL57Q9BQC6 102 aaKnown RBP6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 SELENOSQ9BQE4 189 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 SARGQ9BW04 601 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 KRTAP9-9Q9BYP9 154 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 KRTAP9-4Q9BYQ2 154 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 CNTNAP3Q9BZ76 1288 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 CD244Q9BZW8 370 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 SPNS1Q9H2V7 528 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 MRPL46Q9H2W6 279 aaKnown RBP6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 PELI2Q9HAT8 420 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 TMEM184CQ9NVA4 438 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 DNAJC11Q9NVH1 559 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 MKS1Q9NXB0 559 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 TMEM216Q9P0N5 145 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 CPSF2Q9P2I0 782 aaKnown RBP6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 EMCNQ9ULC0 261 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 SNX7Q9UNH6 387 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 RAXQ9Y2V3 346 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 PCDHB3Q9Y5E6 796 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 ACACAQ13085 2346 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 CACNA1GO43497 2377 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 KMT2BQ9UMN6 2715 aaPredicted RBP6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 LOC105369274A0A096LPK9 316 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 LOC102723532A0A0G2JNH3 316 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 TEX51A0A1B0GUA7 166 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 TLDC2A0PJX2 215 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 FITM1A5D6W6 292 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 LRRC14BA6NHZ5 514 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 A8MT66 165 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 STX16-NPEPL1H3BU86 382 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 E2F3O00716 465 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 STX16O14662 325 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 MAP2K7O14733 419 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 ZSCAN9O15535 394 aaPredicted RBP6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 P2RX6O15547 441 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 CCNT2O60583 730 aaKnown RBP6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 RAD1O60671 282 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 PRAMEF4O60810 478 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 OR2B3O76000 313 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 SIX3O95343 332 aaPredicted RBP6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 GFAPP14136 432 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 KRT4P19013 534 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 GNAZP19086 355 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 RORAP35398 523 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 EIF2S3P41091 472 aaKnown RBP6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 BCL6P41182 706 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 STAT5AP42229 794 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 CCR8P51685 355 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 VSX2P58304 361 aaPredicted RBP6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 RPS15AP62244 130 aaKnown RBP6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 PRR20EP86478 221 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 PRR20CP86479 221 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 PRR20DP86480 221 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 PRR20BP86481 221 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 PRR20AP86496 221 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 NFKB2Q00653 900 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 REEP5Q00765 189 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 MEF2AQ02078 507 aaPredicted RBP6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 SLC18A2Q05940 514 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 CLN3Q13286 438 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 E2F2Q14209 437 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 PCBP2Q15366 365 aaKnown RBP eCLIP6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 PDK4Q16654 411 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 PFKFB4Q16877 469 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 KRT71Q3SY84 523 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 TCTE1Q5JU00 501 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 PRAMEF9Q5VWM5 478 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 ZNF385CQ66K41 422 aaPredicted RBP6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 FBXO42Q6P3S6 717 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 LRIG3Q6UXM1 1119 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 SLCO4C1Q6ZQN7 724 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 TIPARPQ7Z3E1 657 aaKnown RBP6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 VN1R4Q7Z5H5 301 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 TMPRSS11BQ86T26 416 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 PLD3Q8IV08 490 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 MCATQ8IVS2 390 aaKnown RBP6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 GPR135Q8IZ08 494 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 NLGN4XQ8N0W4 816 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 OR4N4Q8N0Y3 316 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 C4orf33Q8N1A6 199 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 PTGR2Q8N8N7 351 aaPredicted RBP6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 SLC38A9Q8NBW4 561 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 GALNT6Q8NCL4 622 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 NLGN4YQ8NFZ3 816 aaPredicted RBP6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 KCNE4Q8WWG9 221 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 N4BP2L2Q92802 583 aaPredicted RBP6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 NKD1Q969G9 470 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 WDR34Q96EX3 536 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 APOPT1Q96IL0 206 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 SCYL1Q96KG9 808 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 LRFN5Q96NI6 719 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 SPRTNQ9H040 489 aaPredicted RBP6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 ACTR5Q9H9F9 607 aaPredicted RBP6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 GPRC5BQ9NZH0 403 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 OPTCQ9UBM4 332 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 DCDC2Q9UHG0 476 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 SERTAD3Q9UJW9 196 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 TMCO1Q9UM00 188 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 SRPK3Q9UPE1 567 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms