RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 KCNJ11Q14654 390 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 PUM1Q14671 1186 aaKnown RBP eCLIP12.23□□□□□ -0.45
DDX55-206ENST00000539934 ANGPT1Q15389 498 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 LBHQ53QV2 105 aaPredicted RBP12.23□□□□□ -0.45
DDX55-206ENST00000539934 FAM122BQ7Z309 247 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 GPALPP1Q8IXQ4 340 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 DNAJB8Q8NHS0 232 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 C10orf82Q8WW14 230 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 ROBO4Q8WZ75 1007 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 EXOSC8Q96B26 276 aaKnown RBP12.23□□□□□ -0.45
DDX55-206ENST00000539934 FUBP3Q96I24 572 aaKnown RBP eCLIP12.23□□□□□ -0.45
DDX55-206ENST00000539934 ESRP2Q9H6T0 727 aaKnown RBP12.23□□□□□ -0.45
DDX55-206ENST00000539934 AKIP1Q9NQ31 210 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 ANLNQ9NQW6 1124 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 ZMYM5Q9UJ78 669 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 MID2Q9UJV3 735 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 ZNF229Q9UJW7 825 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 TRHDEQ9UKU6 1024 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 ATXN7L1Q9ULK2 861 aaPredicted RBP12.23□□□□□ -0.45
DDX55-206ENST00000539934 CACNA1IQ9P0X4 2223 aa12.23□□□□□ -0.45
DDX55-206ENST00000539934 CHD6Q8TD26 2715 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 ARHGAP42A6NI28 874 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 FAM72CH0Y354 149 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 B4GAT1O43505 415 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 H6PDO95479 791 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 CRYABP02511 175 aaKnown RBP12.22□□□□□ -0.45
DDX55-206ENST00000539934 KLK3P07288 261 aaPredicted RBP12.22□□□□□ -0.45
DDX55-206ENST00000539934 TRAPPC2P0DI81 140 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 TRAPPC2BP0DI82 140 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 ZNF8P17098 575 aaPredicted RBP12.22□□□□□ -0.45
DDX55-206ENST00000539934 KRT15P19012 456 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 SLC1A3P43003 542 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 CXCR3P49682 368 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 NFATC3Q12968 1075 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 POLD3Q15054 466 aaPredicted RBP12.22□□□□□ -0.45
DDX55-206ENST00000539934 MSS51Q4VC12 460 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 FAM72AQ5TYM5 149 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 FAM72DQ6L9T8 149 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 VSTM1Q6UX27 236 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 TMEM184AQ6ZMB5 413 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 KIAA0408Q6ZU52 694 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 CREB3L2Q70SY1 520 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 EFL1Q7Z2Z2 1120 aaKnown RBP12.22□□□□□ -0.45
DDX55-206ENST00000539934 SNX20Q7Z614 316 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 CAMKMTQ7Z624 323 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 SLC22A16Q86VW1 577 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 FAM72BQ86X60 149 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 ZFAND4Q86XD8 727 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 PLCZ1Q86YW0 608 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 LIX1LQ8IVB5 337 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 UBALD2Q8IYN6 164 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 NKAPQ8N5F7 415 aaKnown RBP12.22□□□□□ -0.45
DDX55-206ENST00000539934 TTC29Q8NA56 475 aaPredicted RBP12.22□□□□□ -0.45
DDX55-206ENST00000539934 CLRN3Q8NCR9 226 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 CCNYQ8ND76 341 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 FBXO36Q8NEA4 188 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 OR4M2Q8NGB6 313 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 RNASE11Q8TAA1 199 aaKnown RBP12.22□□□□□ -0.45
DDX55-206ENST00000539934 NANPQ8TBE9 248 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 LGMNQ99538 433 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 CDCA3Q99618 268 aaPredicted RBP12.22□□□□□ -0.45
DDX55-206ENST00000539934 ASB4Q9Y574 426 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 OR6C70A6NIJ9 312 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 E7ESA3 106 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 POC1B-GALNT4F8VUJ3 575 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 I6L893 689 aaPredicted RBP12.22□□□□□ -0.45
DDX55-206ENST00000539934 TM7SF2O76062 418 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 UGT2B4P06133 528 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 APRTP07741 180 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 JUPP14923 745 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 EPCAMP16422 314 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 ERCC2P18074 760 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 GRK3P35626 688 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 MRPL58Q14197 206 aaKnown RBP12.22□□□□□ -0.45
DDX55-206ENST00000539934 PAFAH1B3Q15102 231 aaKnown RBP12.22□□□□□ -0.45
DDX55-206ENST00000539934 PDK1Q15118 436 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 KLHL26Q53HC5 615 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 FGD3Q5JSP0 725 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 SDHAF4Q5VUM1 108 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 LPCAT4Q643R3 524 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 AMIGO1Q86WK6 493 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 ADGRG3Q86Y34 549 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 ZCCHC7Q8N3Z6 543 aaKnown RBP12.22□□□□□ -0.45
DDX55-206ENST00000539934 NETO2Q8NC67 525 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 ZNF248Q8NDW4 579 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 OR7G3Q8NG95 312 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 PYDC1Q8WXC3 89 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 FAM111AQ96PZ2 611 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 CCM2LQ9NUG4 571 aaPredicted RBP12.22□□□□□ -0.45
DDX55-206ENST00000539934 MARCH5Q9NX47 278 aa12.22□□□□□ -0.45
DDX55-206ENST00000539934 KMT2BQ9UMN6 2715 aaPredicted RBP12.21□□□□□ -0.45
DDX55-206ENST00000539934 FRYQ5TBA9 3013 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 SHROOM3Q8TF72 1996 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 A0A0U1RQV5 110 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 C2orf71A6NGG8 1288 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 OR6C75A6NL08 312 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 NARSO43776 548 aaKnown RBP12.21□□□□□ -0.45
DDX55-206ENST00000539934 S100A8P05109 93 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 GSNP06396 782 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 PGRP06401 933 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms