RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 AGAP7PQ5VUJ5 663 aa3.66□□□□□ -1.82
CCDC7-209ENST00000539197 OR4A47Q6IF82 309 aa3.66□□□□□ -1.82
CCDC7-209ENST00000539197 MFSD12Q6NUT3 480 aa3.66□□□□□ -1.82
CCDC7-209ENST00000539197 MAATS1Q7Z4T9 603 aa3.66□□□□□ -1.82
CCDC7-209ENST00000539197 PIK3R3Q92569 461 aa3.66□□□□□ -1.82
CCDC7-209ENST00000539197 NXNL1Q96CM4 212 aa3.66□□□□□ -1.82
CCDC7-209ENST00000539197 POLR3GLQ9BT43 218 aa3.66□□□□□ -1.82
CCDC7-209ENST00000539197 DNAI2Q9GZS0 605 aa3.66□□□□□ -1.82
CCDC7-209ENST00000539197 RNF150Q9ULK6 438 aa3.66□□□□□ -1.82
CCDC7-209ENST00000539197 NAALAD2Q9Y3Q0 740 aa3.66□□□□□ -1.82
CCDC7-209ENST00000539197 LOC100509620A0A075B734 347 aa3.65□□□□□ -1.83
CCDC7-209ENST00000539197 F5H0A9 414 aaPredicted RBP3.65□□□□□ -1.83
CCDC7-209ENST00000539197 ATP6V1B1P15313 513 aa3.65□□□□□ -1.83
CCDC7-209ENST00000539197 MGMTP16455 207 aa3.65□□□□□ -1.83
CCDC7-209ENST00000539197 NDST2P52849 883 aa3.65□□□□□ -1.83
CCDC7-209ENST00000539197 PSMC6P62333 389 aa3.65□□□□□ -1.83
CCDC7-209ENST00000539197 SRSF9Q13242 221 aaKnown RBP eCLIP3.65□□□□□ -1.83
CCDC7-209ENST00000539197 KIAA0141Q14154 515 aaPredicted RBP3.65□□□□□ -1.83
CCDC7-209ENST00000539197 IL17RELQ6ZVW7 336 aa3.65□□□□□ -1.83
CCDC7-209ENST00000539197 TEX19Q8NA77 164 aa3.65□□□□□ -1.83
CCDC7-209ENST00000539197 METTL21AQ8WXB1 218 aa3.65□□□□□ -1.83
CCDC7-209ENST00000539197 SPACA9Q96E40 222 aaPredicted RBP3.65□□□□□ -1.83
CCDC7-209ENST00000539197 RBM24Q9BX46 236 aaKnown RBP3.65□□□□□ -1.83
CCDC7-209ENST00000539197 OCR1Q9BZK8 76 aa3.65□□□□□ -1.83
CCDC7-209ENST00000539197 EGLN3Q9H6Z9 239 aa3.65□□□□□ -1.83
CCDC7-209ENST00000539197 ZNF215Q9UL58 517 aaPredicted RBP3.65□□□□□ -1.83
CCDC7-209ENST00000539197 AGAP14A8MT82 685 aa3.64□□□□□ -1.83
CCDC7-209ENST00000539197 IPO8O15397 1037 aaKnown RBP3.64□□□□□ -1.83
CCDC7-209ENST00000539197 PPIAP62937 165 aaKnown RBP3.64□□□□□ -1.83
CCDC7-209ENST00000539197 Q1RN00 199 aa3.64□□□□□ -1.83
CCDC7-209ENST00000539197 ALDH1L2Q3SY69 923 aa3.64□□□□□ -1.83
CCDC7-209ENST00000539197 OR4C11Q6IEV9 310 aa3.64□□□□□ -1.83
CCDC7-209ENST00000539197 OR4Q3Q8NH05 313 aa3.64□□□□□ -1.83
CCDC7-209ENST00000539197 TIGD1Q96MW7 591 aa3.64□□□□□ -1.83
CCDC7-209ENST00000539197 GOLPH3LQ9H4A5 285 aa3.64□□□□□ -1.83
CCDC7-209ENST00000539197 RALGAPA1Q6GYQ0 2036 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 IQCMA0A1B0GVH7 501 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 C2CD4DB7Z1M9 353 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 PDHXO00330 501 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 GJB3O75712 270 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 BAG3O95817 575 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 RENP00797 406 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 LMO2P25791 158 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 PKLRP30613 574 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 GCH1P30793 250 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 ZNF75DP51815 510 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 HSPB3Q12988 150 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 PRKG2Q13237 762 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 PLEKHS1Q5SXH7 462 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 LEMD1Q68G75 181 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 SLC24A5Q71RS6 500 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 LINC00346Q8IVM7 164 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 GPC2Q8N158 579 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 NOA1Q8NC60 698 aaKnown RBP3.63□□□□□ -1.83
CCDC7-209ENST00000539197 PI4K2AQ9BTU6 479 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 TEX13BQ9BXU2 312 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 ZNF69Q9UC07 566 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 FAM205AQ6ZU69 1335 aa3.63□□□□□ -1.83
CCDC7-209ENST00000539197 MYH14Q7Z406 1995 aaKnown RBP3.62□□□□□ -1.83
CCDC7-209ENST00000539197 A0A1W2PPK0 400 aa3.62□□□□□ -1.83
CCDC7-209ENST00000539197 FAM168BA1KXE4 195 aa3.62□□□□□ -1.83
CCDC7-209ENST00000539197 MTMR11A4FU01 709 aa3.62□□□□□ -1.83
CCDC7-209ENST00000539197 E9PAM4 449 aa3.62□□□□□ -1.83
CCDC7-209ENST00000539197 RTCAO00442 366 aaKnown RBP3.62□□□□□ -1.83
CCDC7-209ENST00000539197 SIX1Q15475 284 aaPredicted RBP3.62□□□□□ -1.83
CCDC7-209ENST00000539197 UPP1Q16831 310 aa3.62□□□□□ -1.83
CCDC7-209ENST00000539197 C15orf59Q2T9L4 293 aaPredicted RBP3.62□□□□□ -1.83
CCDC7-209ENST00000539197 FAM180BQ6P0A1 224 aa3.62□□□□□ -1.83
CCDC7-209ENST00000539197 TMUB2Q71RG4 321 aa3.62□□□□□ -1.83
CCDC7-209ENST00000539197 C17orf53Q8N3J3 647 aaPredicted RBP3.62□□□□□ -1.83
CCDC7-209ENST00000539197 PRRG4Q9BZD6 226 aa3.62□□□□□ -1.83
CCDC7-209ENST00000539197 PRMT7Q9NVM4 692 aaPredicted RBP3.62□□□□□ -1.83
CCDC7-209ENST00000539197 SLC6A5Q9Y345 797 aa3.62□□□□□ -1.83
CCDC7-209ENST00000539197 A0A1W2PPQ1 181 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 ARHGEF33A8MVX0 844 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 EDNRAP25101 427 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 CHRNA3P32297 505 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 NAP1L1P55209 391 aaKnown RBP3.61□□□□□ -1.83
CCDC7-209ENST00000539197 SRPXP78539 464 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 ITPK1Q13572 414 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 OPCMLQ14982 345 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 PCLAFQ15004 111 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 ZNF79Q15937 498 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 DUSP28Q4G0W2 176 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 C9orf66Q5T8R8 295 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 PRR27Q6MZM9 219 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 SZRD1Q7Z422 152 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 MAML2Q8IZL2 1156 aaPredicted RBP3.61□□□□□ -1.83
CCDC7-209ENST00000539197 LRTM2Q8N967 370 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 BADQ92934 168 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 FAM120BQ96EK7 910 aaKnown RBP3.61□□□□□ -1.83
CCDC7-209ENST00000539197 CDCA3Q99618 268 aaPredicted RBP3.61□□□□□ -1.83
CCDC7-209ENST00000539197 HNRNPABQ99729 332 aaKnown RBP3.61□□□□□ -1.83
CCDC7-209ENST00000539197 SLC2A11Q9BYW1 496 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 SLC39A8Q9C0K1 460 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 SYNCQ9H7C4 482 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 CLEC5AQ9NY25 188 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 GTF3C4Q9UKN8 822 aa3.61□□□□□ -1.83
CCDC7-209ENST00000539197 TDRD6O60522 2096 aaKnown RBP3.6□□□□□ -1.83
CCDC7-209ENST00000539197 TMEM129A0AVI4 362 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms