RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 PCDHGA3Q9Y5H0 932 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 LYVE1Q9Y5Y7 322 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 MN1Q10571 1320 aaPredicted RBP6.7□□□□□ -1.34
PROM1-219ENST00000539194 SLC5A10A0PJK1 596 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 TMEM202A6NGA9 273 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 GABRR3A8MPY1 467 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 CFAP99D6REC4 459 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 H0Y626 953 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 HS6ST1O60243 411 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 SEMA7AO75326 666 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 SOD1P00441 154 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 MT-ND2P03891 347 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 ENGP17813 658 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 GRK3P35626 688 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 LIPAP38571 399 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 OPRD1P41143 372 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 AP1S2P56377 157 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 SMAD3P84022 425 aaKnown RBP6.7□□□□□ -1.34
PROM1-219ENST00000539194 PLIN5Q00G26 463 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 SRSF11Q05519 484 aaKnown RBP6.7□□□□□ -1.34
PROM1-219ENST00000539194 BCL2L1Q07817 233 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 NPRL3Q12980 569 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 TMED1Q13445 227 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 ZNF846Q147U1 533 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 TBCEQ15813 527 aaPredicted RBP6.7□□□□□ -1.34
PROM1-219ENST00000539194 TMEM215Q68D42 235 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 SERPINA13PQ6UXR4 307 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 ANKRD46Q86W74 232 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 FBXO15Q8NCQ5 510 aaPredicted RBP6.7□□□□□ -1.34
PROM1-219ENST00000539194 RHOXF1Q8NHV9 184 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 CSGALNACT1Q8TDX6 532 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 FAM162AQ96A26 154 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 MRGPRX3Q96LB0 322 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 SDHCQ99643 169 aaPredicted RBP6.7□□□□□ -1.34
PROM1-219ENST00000539194 SLX1AQ9BQ83 275 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 TM6SF2Q9BZW4 377 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 CEP44Q9C0F1 390 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 THSD1Q9NS62 852 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 ATP6V1HQ9UI12 483 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 KCND3Q9UK17 655 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 SNX6Q9UNH7 406 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 FAF1Q9UNN5 650 aaPredicted RBP6.7□□□□□ -1.34
PROM1-219ENST00000539194 SPTBN5Q9NRC6 3674 aaKnown RBP6.7□□□□□ -1.34
PROM1-219ENST00000539194 ARRDC5A6NEK1 342 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 GOLGA8CPA6NN73 597 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 FADS2P1A8MWK0 482 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 HOXA2O43364 376 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 COQ9O75208 318 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 TRIM16O95361 564 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 KRT6AP02538 564 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 KRT6BP04259 564 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 NUDT7P0C024 238 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 OCM2P0CE71 109 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 OCMP0CE72 109 aaPredicted RBP6.7□□□□□ -1.34
PROM1-219ENST00000539194 HSD3B1P14060 373 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 HSD3B2P26439 372 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 MAP4P27816 1152 aaKnown RBP6.7□□□□□ -1.34
PROM1-219ENST00000539194 FMO3P31513 532 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 KRT6CP48668 564 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 MAPK10P53779 464 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 RGNQ15493 299 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 MAPK11Q15759 364 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 ZNF385BQ569K4 471 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 HABP4Q5JVS0 413 aaKnown RBP6.7□□□□□ -1.34
PROM1-219ENST00000539194 LILRA6Q6PI73 481 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.7□□□□□ -1.34
PROM1-219ENST00000539194 TECPR1Q7Z6L1 1165 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 ATCAYQ86WG3 371 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 BBS7Q8IWZ6 715 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 CLECL1Q8IZS7 167 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 NAT16Q8N8M0 369 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 DHRS1Q96LJ7 313 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 MAGEB10Q96LZ2 347 aaPredicted RBP6.7□□□□□ -1.34
PROM1-219ENST00000539194 VPS35Q96QK1 796 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 C2orf49Q9BVC5 232 aaPredicted RBP6.7□□□□□ -1.34
PROM1-219ENST00000539194 ANKHQ9HCJ1 492 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.7□□□□□ -1.34
PROM1-219ENST00000539194 SLCO3A1Q9UIG8 710 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 BLOC1S6Q9UL45 172 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 INSL5Q9Y5Q6 135 aa6.7□□□□□ -1.34
PROM1-219ENST00000539194 METTL15A6NJ78 407 aa6.69□□□□□ -1.34
PROM1-219ENST00000539194 RNASET2O00584 256 aaKnown RBP6.69□□□□□ -1.34
PROM1-219ENST00000539194 FABP3P05413 133 aa6.69□□□□□ -1.34
PROM1-219ENST00000539194 GSNP06396 782 aa6.69□□□□□ -1.34
PROM1-219ENST00000539194 LAMP1P11279 417 aa6.69□□□□□ -1.34
PROM1-219ENST00000539194 ATP1B2P14415 290 aaPredicted RBP6.69□□□□□ -1.34
PROM1-219ENST00000539194 S100A3P33764 101 aa6.69□□□□□ -1.34
PROM1-219ENST00000539194 EFNB1P98172 346 aa6.69□□□□□ -1.34
PROM1-219ENST00000539194 PLD1Q13393 1074 aa6.69□□□□□ -1.34
PROM1-219ENST00000539194 LAPTM4AQ15012 233 aa6.69□□□□□ -1.34
PROM1-219ENST00000539194 CPSF6Q16630 551 aaKnown RBP eCLIP6.69□□□□□ -1.34
PROM1-219ENST00000539194 RGS21Q2M5E4 152 aa6.69□□□□□ -1.34
PROM1-219ENST00000539194 ZDHHC20Q5W0Z9 365 aa6.69□□□□□ -1.34
PROM1-219ENST00000539194 ERICH5Q6P6B1 374 aa6.69□□□□□ -1.34
PROM1-219ENST00000539194 UBE2R2Q712K3 238 aaPredicted RBP6.69□□□□□ -1.34
PROM1-219ENST00000539194 GALNT10Q86SR1 603 aa6.69□□□□□ -1.34
PROM1-219ENST00000539194 ADIPOR2Q86V24 386 aa6.69□□□□□ -1.34
PROM1-219ENST00000539194 FAM9CQ8IZT9 166 aa6.69□□□□□ -1.34
PROM1-219ENST00000539194 HSH2DQ96JZ2 352 aa6.69□□□□□ -1.34
PROM1-219ENST00000539194 ZBTB18Q99592 522 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms