RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ENO3P13929 434 aaPredicted RBP18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 TNFSF10P50591 281 aa18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 AP2B1P63010 937 aa18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 CTBP1Q13363 440 aa18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 FAM53BQ14153 422 aa18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 NDUFA9Q16795 377 aa18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 SYT16Q17RD7 645 aa18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 DENND6AQ8IWF6 608 aa18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 XAB2Q9HCS7 855 aaKnown RBP18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 MKL2Q9ULH7 1088 aa18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 MED16Q9Y2X0 877 aa18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 MRPS2Q9Y399 296 aaKnown RBP18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 PCNX1Q96RV3 2341 aa18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 ZCWPW2A0A1B0GU75 182 aa18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 P2RX6O15547 441 aa18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 STSP08842 583 aa18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 ICAM2P13598 275 aa18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 SKIV2L2P42285 1042 aaKnown RBP18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 AVPR1BP47901 424 aa18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 INAQ16352 499 aa18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 ZNF549Q6P9A3 640 aa18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 TMEM205Q6UW68 189 aa18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 CYHR1Q6ZMK1 362 aa18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 PLD3Q8IV08 490 aa18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 ZC3H7AQ8IWR0 971 aaKnown RBP18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 LMNTD2Q8IXW0 634 aa18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 LRRC56Q8IYG6 542 aaPredicted RBP18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 MCUQ8NE86 351 aa18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 ZNF700Q9H0M5 742 aa18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 DHRS7Q9Y394 339 aa18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 COMMD10Q9Y6G5 202 aa18.66■□□□□ 0.58
TNFRSF1B-204ENST00000536782 A0A1B0GUH1 482 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 GOLGA8MH3BSY2 632 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 H7BY64 318 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 KIF5CO60282 957 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 CELA2AP08217 269 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 HRH2P25021 359 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 SLC1A2P43004 574 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 MAT1AQ00266 395 aaKnown RBP18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 PCOLCEQ15113 449 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 ZRSR2Q15696 482 aaKnown RBP18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 ZNF324BQ6AW86 544 aaPredicted RBP18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 TTC27Q6P3X3 843 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 UBE2R2Q712K3 238 aaPredicted RBP18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 SLC34A3Q8N130 599 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 CALML6Q8TD86 181 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 METTL21AQ8WXB1 218 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 MAGOHBQ96A72 148 aaKnown RBP18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 PRAP1Q96NZ9 151 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 SERPINB12Q96P63 405 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 TAAR6Q96RI8 345 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 GPR21Q99679 349 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 TUBB6Q9BUF5 446 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 C20orf96Q9NUD7 363 aaPredicted RBP18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 TMEM184CQ9NVA4 438 aa18.65■□□□□ 0.58
TNFRSF1B-204ENST00000536782 H0YIG0 161 aa18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 NRDCO43847 1150 aa18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 ZG16O60844 167 aa18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 F10P00742 488 aa18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 C8orf89P0DMQ9 161 aa18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 ITGAMP11215 1152 aa18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 IMPA1P29218 277 aa18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 LONRF1Q17RB8 773 aa18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 FJX1Q86VR8 437 aa18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 SPNS2Q8IVW8 549 aa18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 LRRC8AQ8IWT6 810 aa18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 CD200R1Q8TD46 325 aa18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 MCOLN3Q8TDD5 553 aa18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 NR4A3Q92570 626 aa18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 RNF32Q9H0A6 362 aa18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 CCDC177Q9NQR7 707 aaPredicted RBP18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 MAD1L1Q9Y6D9 718 aa18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 CPAMD8Q8IZJ3 1885 aa18.64■□□□□ 0.57
TNFRSF1B-204ENST00000536782 ENO4A6NNW6 628 aa18.63■□□□□ 0.57
TNFRSF1B-204ENST00000536782 EIF3FO00303 357 aaPredicted RBP18.63■□□□□ 0.57
TNFRSF1B-204ENST00000536782 WDPCPO95876 746 aa18.63■□□□□ 0.57
TNFRSF1B-204ENST00000536782 TDGF1P3P51864 188 aa18.63■□□□□ 0.57
TNFRSF1B-204ENST00000536782 RPS15AP62244 130 aaKnown RBP18.63■□□□□ 0.57
TNFRSF1B-204ENST00000536782 ABHD17BQ5VST6 288 aa18.63■□□□□ 0.57
TNFRSF1B-204ENST00000536782 HIBCHQ6NVY1 386 aaPredicted RBP18.63■□□□□ 0.57
TNFRSF1B-204ENST00000536782 PIWIL4Q7Z3Z4 852 aaKnown RBP18.63■□□□□ 0.57
TNFRSF1B-204ENST00000536782 CPNE9Q8IYJ1 553 aa18.63■□□□□ 0.57
TNFRSF1B-204ENST00000536782 OR9A4Q8NGU2 314 aa18.63■□□□□ 0.57
TNFRSF1B-204ENST00000536782 IMMP1LQ96LU5 166 aa18.63■□□□□ 0.57
TNFRSF1B-204ENST00000536782 GRPEL1Q9HAV7 217 aa18.63■□□□□ 0.57
TNFRSF1B-204ENST00000536782 FBXO5Q9UKT4 447 aa18.63■□□□□ 0.57
TNFRSF1B-204ENST00000536782 KCNE1BA0A087WTH5 132 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 HAUS5O94927 633 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 NSA2O95478 260 aaKnown RBP18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 STATHP02808 62 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 CYC1P08574 325 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 MYBL2P10244 700 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 COILP38432 576 aaPredicted RBP18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 MAGEA3P43357 314 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 EFNA3P52797 238 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 KCNK10P57789 538 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 MFSD4BQ5TF39 518 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 C1QL3Q5VWW1 255 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 LRRC8EQ6NSJ5 796 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms