RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 CD63P08962 238 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 OTX2P32243 289 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 FOLR3P41439 243 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 CCL11P51671 97 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 TAS2R39P59534 338 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 IFFO1Q0D2I5 559 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 FAM214AQ32MH5 1076 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 MROH9Q5TGP6 573 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 MBOAT1Q6ZNC8 495 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 RAB43Q86YS6 212 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 DCAKDQ8WVC6 231 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 LINGO1Q96FE5 620 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 MLXIPLQ9NP71 852 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ABCF3Q9NUQ8 709 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 STOX2Q9P2F5 926 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ANAPC2Q9UJX6 822 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 HYKKA2RU49 373 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 H0YGG7 62 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 CEACAM4O75871 244 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 CCNDBP1O95273 360 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 EIF2S1P05198 315 aaKnown RBP17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 UMODP07911 640 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 STMN1P16949 149 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 OR1D4P47884 311 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ARF3P61204 181 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 SP140Q13342 867 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PHKG1Q16816 387 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PRTGQ2VWP7 1150 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ADGRD1Q6QNK2 874 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 OVCH1Q7RTY7 1134 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 MRGPREQ86SM8 312 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 MYO1HQ8N1T3 1032 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 METTL27Q8N6F8 245 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 TMEM102Q8N9M5 508 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 MCOLN3Q8TDD5 553 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 FKBP10Q96AY3 582 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PTERQ96BW5 349 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 CCDC138Q96M89 665 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 OR2A5Q96R48 311 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 EPN3Q9H201 632 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PARVBQ9HBI1 364 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 POPDC3Q9HBV1 291 aa17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 CUEDC1Q9NWM3 386 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PSMC3IPQ9P2W1 217 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PCDHGA9Q9Y5G4 932 aaKnown RBP17.05■□□□□ 0.32
TNFRSF1A-209ENST00000536717 SCN2AQ99250 2005 aa17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 SLC16A5O15375 505 aa17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ALBP02768 609 aa17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 GCAP28676 217 aa17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 TBPL1P62380 186 aa17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ABATP80404 500 aa17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 BMPR2Q13873 1038 aa17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 NKG7Q16617 165 aa17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 COLEC12Q5KU26 742 aa17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 BEND6Q5SZJ8 279 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 THEMIS2Q5TEJ8 643 aa17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ASB18Q6ZVZ8 466 aa17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 MED25Q71SY5 747 aa17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 C10orf90Q96M02 699 aa17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 SPSB2Q99619 263 aa17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 SLC25A23Q9BV35 468 aa17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 SLC26A1Q9H2B4 701 aa17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 CAB39LQ9H9S4 337 aa17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 CCDC177Q9NQR7 707 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 RP1L1Q8IWN7 2480 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF1A-209ENST00000536717 IQANK1A0A1B0GTG1 560 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 SNRPAP09012 282 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PIM1P11309 404 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 EZRP15311 586 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 CASRP41180 1078 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 IL2P60568 153 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 RAB10P61026 200 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 RELAQ04206 551 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 TLE1Q04724 770 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 KLRB1Q12918 225 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ZXDCQ2QGD7 858 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 TMEM207Q6UWW9 146 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 RAPH1Q70E73 1250 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PPP1R32Q7Z5V6 425 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 CEP97Q8IW35 865 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 FDCSPQ8NFU4 85 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 MTBPQ96DY7 904 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 IP6K3Q96PC2 410 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ATG10Q9H0Y0 220 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 WDR54Q9H977 334 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 GPAMQ9HCL2 828 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 CTSFQ9UBX1 484 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 SH2B3Q9UQQ2 575 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PLAAQ9Y263 795 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 MAU2Q9Y6X3 613 aa17.03■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PRRC2CQ9Y520 2896 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 HMX2A2RU54 273 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 H7BY64 318 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 HAT1O14929 419 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 CDH16O75309 829 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ZNF37AP17032 561 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 CRABP2P29373 138 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 SLCO1A2P46721 670 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 SERPINB8P50452 374 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 RRADP55042 308 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms