RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 SLC38A9Q8NBW4 561 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 ZNF740Q8NDX6 193 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 SNIP1Q8TAD8 396 aaKnown RBP11.54□□□□□ -0.56
CHD4-203ENST00000535717 APOPT1Q96IL0 206 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 CAPS2Q9BXY5 557 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 SPNS1Q9H2V7 528 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 CENPHQ9H3R5 247 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 PELI2Q9HAT8 420 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 ENAMQ9NRM1 1142 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 STARD5Q9NSY2 213 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 ARGLU1Q9NWB6 273 aaPredicted RBP11.54□□□□□ -0.56
CHD4-203ENST00000535717 MKS1Q9NXB0 559 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 GPRC5BQ9NZH0 403 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 TMEM184BQ9Y519 407 aaPredicted RBP11.54□□□□□ -0.56
CHD4-203ENST00000535717 PCDHB3Q9Y5E6 796 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 TNPO3Q9Y5L0 923 aaKnown RBP11.54□□□□□ -0.56
CHD4-203ENST00000535717 DSPP15924 2871 aaKnown RBP11.54□□□□□ -0.56
CHD4-203ENST00000535717 ZFHX4Q86UP3 3567 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 MDC1Q14676 2089 aaKnown RBP11.53□□□□□ -0.56
CHD4-203ENST00000535717 KCNE1BA0A087WTH5 132 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 TRBC2A0A5B9 178 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 TMEM8BA6NDV4 472 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.53□□□□□ -0.56
CHD4-203ENST00000535717 G3V2L1 256 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 STMND1H3BQB6 276 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 TAF4O00268 1085 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 CLGNO14967 610 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 ZSCAN9O15535 394 aaPredicted RBP11.53□□□□□ -0.56
CHD4-203ENST00000535717 ZNF749O43361 778 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 SPAG7O75391 227 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 DLGAP3O95886 979 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 EIF2S1P05198 315 aaKnown RBP11.53□□□□□ -0.56
CHD4-203ENST00000535717 C1GALT1C1LP0DN25 315 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 EPB42P16452 691 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 TAC1P20366 129 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 ATP5F1P24539 256 aaPredicted RBP11.53□□□□□ -0.56
CHD4-203ENST00000535717 GRK3P35626 688 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 BCL6P41182 706 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 GCGRP47871 477 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 PCBP4P57723 403 aaKnown RBP11.53□□□□□ -0.56
CHD4-203ENST00000535717 RPS15AP62244 130 aaKnown RBP11.53□□□□□ -0.56
CHD4-203ENST00000535717 NFKB2Q00653 900 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 REEP5Q00765 189 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 TERF2Q15554 542 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 CCDC153Q494R4 210 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 TNFAIP8L3Q5GJ75 292 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 TCTE1Q5JU00 501 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 WASHC2DQ5SRD0 308 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 ATG9BQ674R7 924 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 METTL2BQ6P1Q9 378 aaKnown RBP11.53□□□□□ -0.56
CHD4-203ENST00000535717 TLDC1Q6P9B6 456 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 DTX1Q86Y01 620 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 ZNF655Q8N720 491 aaPredicted RBP11.53□□□□□ -0.56
CHD4-203ENST00000535717 KDF1Q8NAX2 398 aaPredicted RBP11.53□□□□□ -0.56
CHD4-203ENST00000535717 GALNT6Q8NCL4 622 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 ZCCHC14Q8WYQ9 949 aaKnown RBP11.53□□□□□ -0.56
CHD4-203ENST00000535717 PGM2Q96G03 612 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 SMC6Q96SB8 1091 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 SARGQ9BW04 601 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 ACTR5Q9H9F9 607 aaPredicted RBP11.53□□□□□ -0.56
CHD4-203ENST00000535717 IRAK4Q9NWZ3 460 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 PCTPQ9UKL6 214 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 PLLPQ9Y342 182 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 PCDHGA4Q9Y5G9 962 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 AP1M2Q9Y6Q5 423 aa11.53□□□□□ -0.56
CHD4-203ENST00000535717 MAP1BP46821 2468 aaKnown RBP11.53□□□□□ -0.56
CHD4-203ENST00000535717 FITM1A5D6W6 292 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 E2F3O00716 465 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 P2RX6O15547 441 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 OR1F1O43749 312 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 CPNE3O75131 537 aaKnown RBP11.52□□□□□ -0.57
CHD4-203ENST00000535717 STATHP02808 62 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 MYZAPP0CAP1 466 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 LIPCP11150 499 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 CD22P20273 847 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 CASP2P42575 452 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 PCDH1Q08174 1060 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 CHIT1Q13231 466 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 GTF2H2Q13888 395 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 DOC2AQ14183 400 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 SLBPQ14493 270 aaKnown RBP eCLIP11.52□□□□□ -0.57
CHD4-203ENST00000535717 TGIF1Q15583 401 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 HKDC1Q2TB90 917 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 PRTGQ2VWP7 1150 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 XKR6Q5GH73 641 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 GTF2H2CQ6P1K8 395 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 C6orf15Q6UXA7 325 aaPredicted RBP11.52□□□□□ -0.57
CHD4-203ENST00000535717 ZYG11AQ6WRX3 759 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 ZNF771Q7L3S4 317 aaPredicted RBP11.52□□□□□ -0.57
CHD4-203ENST00000535717 GOLGA7Q7Z5G4 137 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 VN1R4Q7Z5H5 301 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 EXOC3L1Q86VI1 746 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 PROSER1Q86XN7 944 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 CSNK1A1LQ8N752 337 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 MFSD9Q8NBP5 474 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 ZNF248Q8NDW4 579 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 RERGQ96A58 199 aaPredicted RBP11.52□□□□□ -0.57
CHD4-203ENST00000535717 TM4SF19Q96DZ7 209 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 THAP11Q96EK4 314 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 WDR34Q96EX3 536 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms