RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 TTC29Q8NA56 475 aaPredicted RBP23.13■■□□□ 1.29
SIPA1-210ENST00000534406 OR4K1Q8NGD4 311 aa23.13■■□□□ 1.29
SIPA1-210ENST00000534406 THAP11Q96EK4 314 aa23.13■■□□□ 1.29
SIPA1-210ENST00000534406 AIF1LQ9BQI0 150 aa23.13■■□□□ 1.29
SIPA1-210ENST00000534406 ENAMQ9NRM1 1142 aa23.13■■□□□ 1.29
SIPA1-210ENST00000534406 TEX51A0A1B0GUA7 166 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 STX16-NPEPL1H3BU86 382 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 TAF4O00268 1085 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 STX16O14662 325 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 CLGNO14967 610 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 SEC16AO15027 2179 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 EIF2S1P05198 315 aaKnown RBP23.12■■□□□ 1.29
SIPA1-210ENST00000534406 SBK3P0C264 359 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 TAC1P20366 129 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 CRHR1P34998 444 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 BCL6P41182 706 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 CCT5P48643 541 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 MEF2AQ02078 507 aaPredicted RBP23.12■■□□□ 1.29
SIPA1-210ENST00000534406 SLC18A2Q05940 514 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 PCBP2Q15366 365 aaKnown RBP eCLIP23.12■■□□□ 1.29
SIPA1-210ENST00000534406 WASHC2DQ5SRD0 308 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 CEP85LQ5SZL2 805 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 ATG9BQ674R7 924 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 METTL2BQ6P1Q9 378 aaKnown RBP23.12■■□□□ 1.29
SIPA1-210ENST00000534406 SLCO4C1Q6ZQN7 724 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 TIPARPQ7Z3E1 657 aaKnown RBP23.12■■□□□ 1.29
SIPA1-210ENST00000534406 SRRM1Q8IYB3 904 aaKnown RBP23.12■■□□□ 1.29
SIPA1-210ENST00000534406 CACNA2D3Q8IZS8 1091 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 TMEM151AQ8N4L1 468 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 CSNK1A1LQ8N752 337 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 CLIP3Q96DZ5 547 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 PHF21BQ96EK2 531 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 LRFN5Q96NI6 719 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 NDC1Q9BTX1 674 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 DPH1Q9BZG8 443 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 SYNPO2LQ9H987 977 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 MKS1Q9NXB0 559 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 ANGPTL3Q9Y5C1 460 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 PCDHGA4Q9Y5G9 962 aa23.12■■□□□ 1.29
SIPA1-210ENST00000534406 TRBC2A0A5B9 178 aa23.11■■□□□ 1.29
SIPA1-210ENST00000534406 FEZF1A0PJY2 475 aa23.11■■□□□ 1.29
SIPA1-210ENST00000534406 FITM1A5D6W6 292 aa23.11■■□□□ 1.29
SIPA1-210ENST00000534406 RGS16O15492 202 aaPredicted RBP23.11■■□□□ 1.29
SIPA1-210ENST00000534406 PIK3CGP48736 1102 aa23.11■■□□□ 1.29
SIPA1-210ENST00000534406 GPS2Q13227 327 aa23.11■■□□□ 1.29
SIPA1-210ENST00000534406 TGIF1Q15583 401 aa23.11■■□□□ 1.29
SIPA1-210ENST00000534406 IL22RA1Q8N6P7 574 aa23.11■■□□□ 1.29
SIPA1-210ENST00000534406 NKD1Q969G9 470 aa23.11■■□□□ 1.29
SIPA1-210ENST00000534406 APOPT1Q96IL0 206 aa23.11■■□□□ 1.29
SIPA1-210ENST00000534406 EHD1Q9H4M9 534 aa23.11■■□□□ 1.29
SIPA1-210ENST00000534406 STARD5Q9NSY2 213 aa23.11■■□□□ 1.29
SIPA1-210ENST00000534406 TXLNGQ9NUQ3 528 aa23.11■■□□□ 1.29
SIPA1-210ENST00000534406 WDR70Q9NW82 654 aa23.11■■□□□ 1.29
SIPA1-210ENST00000534406 ARGLU1Q9NWB6 273 aaPredicted RBP23.11■■□□□ 1.29
SIPA1-210ENST00000534406 ZMIZ1Q9ULJ6 1067 aa23.11■■□□□ 1.29
SIPA1-210ENST00000534406 KCNE1BA0A087WTH5 132 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 LRRC14BA6NHZ5 514 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 A8MT66 165 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 TXNDC9O14530 226 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 KLK10O43240 276 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 SIX3O95343 332 aaPredicted RBP23.1■■□□□ 1.29
SIPA1-210ENST00000534406 C1GALT1C1LP0DN25 315 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 EPB42P16452 691 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 VARSP26640 1264 aaKnown RBP23.1■■□□□ 1.29
SIPA1-210ENST00000534406 EEF1DP29692 281 aaKnown RBP23.1■■□□□ 1.29
SIPA1-210ENST00000534406 GCGRP47871 477 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 ARSFP54793 590 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 NFKB2Q00653 900 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 PRTGQ2VWP7 1150 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 YOD1Q5VVQ6 348 aaPredicted RBP23.1■■□□□ 1.29
SIPA1-210ENST00000534406 RHBDD2Q6NTF9 364 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 LRRC69Q6ZNQ3 347 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 TEX9Q8N6V9 391 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 MFSD9Q8NBP5 474 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 SLC38A9Q8NBW4 561 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 PROKR1Q8TCW9 393 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 SARGQ9BW04 601 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 NLNQ9BYT8 704 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 IQCGQ9H095 443 aaKnown RBP23.1■■□□□ 1.29
SIPA1-210ENST00000534406 SPNS1Q9H2V7 528 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 SENP1Q9P0U3 644 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 EMCNQ9ULC0 261 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 GRID1Q9ULK0 1009 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 FER1L5A0AVI2 2057 aa23.1■■□□□ 1.29
SIPA1-210ENST00000534406 OR1F1O43749 312 aa23.09■■□□□ 1.29
SIPA1-210ENST00000534406 H2AFYO75367 372 aaKnown RBP23.09■■□□□ 1.29
SIPA1-210ENST00000534406 CCNYL3P0C7X3 344 aa23.09■■□□□ 1.29
SIPA1-210ENST00000534406 EPORP19235 508 aa23.09■■□□□ 1.29
SIPA1-210ENST00000534406 ATP5F1P24539 256 aaPredicted RBP23.09■■□□□ 1.29
SIPA1-210ENST00000534406 CXCR2P25025 360 aa23.09■■□□□ 1.29
SIPA1-210ENST00000534406 RORAP35398 523 aa23.09■■□□□ 1.29
SIPA1-210ENST00000534406 STAT5AP42229 794 aa23.09■■□□□ 1.29
SIPA1-210ENST00000534406 IRF8Q02556 426 aa23.09■■□□□ 1.29
SIPA1-210ENST00000534406 ABHD18Q0P651 414 aa23.09■■□□□ 1.29
SIPA1-210ENST00000534406 SLBPQ14493 270 aaKnown RBP eCLIP23.09■■□□□ 1.29
SIPA1-210ENST00000534406 CCDC153Q494R4 210 aa23.09■■□□□ 1.29
SIPA1-210ENST00000534406 XKR6Q5GH73 641 aa23.09■■□□□ 1.29
SIPA1-210ENST00000534406 VN1R4Q7Z5H5 301 aa23.09■■□□□ 1.29
SIPA1-210ENST00000534406 SPACA3Q8IXA5 215 aa23.09■■□□□ 1.29
SIPA1-210ENST00000534406 DSELQ8IZU8 1212 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms