RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 TRBC2A0A5B9 178 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 FITM1A5D6W6 292 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 LRRC14BA6NHZ5 514 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 H0YGG7 62 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 SPAG7O75391 227 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 OR2B3O76000 313 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 CAPNS1P04632 268 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 RPS17P08708 135 aaKnown RBP15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 CPA3P15088 417 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 IMPDH1P20839 514 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 ARF3P61204 181 aaPredicted RBP15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 HERVK_113P63132 956 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 LAPTM5Q13571 262 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 FRMPD2BQ6IN97 320 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 GOLGA7Q7Z5G4 137 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 PLD3Q8IV08 490 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 TCP10LQ8TDR4 215 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 FGF11Q92914 225 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 PTCD3Q96EY7 689 aaKnown RBP15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 EFCAB11Q9BUY7 163 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 ERVK-6Q9BXR3 956 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 SPRTNQ9H040 489 aaPredicted RBP15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 C12orf65Q9H3J6 166 aaKnown RBP15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 NT5DC2Q9H857 520 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 COPG2Q9UBF2 871 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 PCTPQ9UKL6 214 aa15.74■□□□□ 0.11
PACSIN3-210ENST00000533686 CEP295Q9C0D2 2601 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 LOC105369274A0A096LPK9 316 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 LOC102723532A0A0G2JNH3 316 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 TXNDC9O14530 226 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 LCMT2O60294 686 aaKnown RBP15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 PRAMEF4O60810 478 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 SCRG1O75711 98 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 WFS1O76024 890 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 TIAF1O95411 115 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 CTSBP07858 339 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 HBQ1P09105 142 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 VARSP26640 1264 aaKnown RBP15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 BCL6P41182 706 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 SCTRP47872 440 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 EMP3P54852 163 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 VSX2P58304 361 aaPredicted RBP15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 DNAJB13P59910 316 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 NAA20P61599 178 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 IRF8Q02556 426 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 CHIT1Q13231 466 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 DOC2AQ14183 400 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 MAP7Q14244 749 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 XKR6Q5GH73 641 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 WASHC2DQ5SRD0 308 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 ZNF678Q5SXM1 525 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 AGBL2Q5U5Z8 902 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 YOD1Q5VVQ6 348 aaPredicted RBP15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 PRAMEF9Q5VWM5 478 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 UNQ6494/PRO21346Q6UXR6 183 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 TMEM126BQ8IUX1 230 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 OR4N4Q8N0Y3 316 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 KRT78Q8N1N4 520 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 CCDC63Q8NA47 563 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 MFSD9Q8NBP5 474 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 ARMC2Q8NEN0 867 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 MDM1Q8TC05 714 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 ZNF483Q8TF39 744 aaPredicted RBP15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 RERGQ96A58 199 aaPredicted RBP15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 TLCD1Q96CP7 247 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 L3HYPDHQ96EM0 354 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 LRFN5Q96NI6 719 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 FAM111AQ96PZ2 611 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 SPNS1Q9H2V7 528 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 IPPKQ9H8X2 491 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 GEMIN8Q9NWZ8 242 aaKnown RBP15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 PCDHGA4Q9Y5G9 962 aa15.73■□□□□ 0.11
PACSIN3-210ENST00000533686 FEZF1A0PJY2 475 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 STMND1H3BQB6 276 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 ZSCAN9O15535 394 aaPredicted RBP15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 PRPF4O43172 522 aaKnown RBP eCLIP15.72■□□□□ 0.116e-8■□□□□ 8.4
PACSIN3-210ENST00000533686 ZNF749O43361 778 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 UGDHO60701 494 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 CPNE3O75131 537 aaKnown RBP15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 STK17BO94768 372 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 KIAA0754O94854 1291 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 DLGAP3O95886 979 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 GSTM2P28161 218 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 AHRP35869 848 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 GCGRP47871 477 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 ARSFP54793 590 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 MEF2AQ02078 507 aaPredicted RBP15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 SLBPQ14493 270 aaKnown RBP eCLIP15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 GRM7Q14831 915 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 PRTGQ2VWP7 1150 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 UNC50Q53HI1 259 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 PAGE2BQ5JRK9 111 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 MANEAQ5SRI9 462 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 LIPJQ5W064 366 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 VN1R4Q7Z5H5 301 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 TTC29Q8NA56 475 aaPredicted RBP15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 CAMKVQ8NCB2 501 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 ZNF740Q8NDX6 193 aa15.72■□□□□ 0.11
PACSIN3-210ENST00000533686 TTLQ8NG68 377 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms