RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 COX15Q7KZN9 410 aa19.51■□□□□ 0.71
CCS-208ENST00000533244 TBC1D1Q86TI0 1168 aaPredicted RBP19.51■□□□□ 0.71
CCS-208ENST00000533244 ISCA2Q86U28 154 aa19.51■□□□□ 0.71
CCS-208ENST00000533244 THOC6Q86W42 341 aaKnown RBP19.51■□□□□ 0.71
CCS-208ENST00000533244 GPSM1Q86YR5 675 aa19.51■□□□□ 0.71
CCS-208ENST00000533244 PDPRQ8NCN5 879 aa19.51■□□□□ 0.71
CCS-208ENST00000533244 NEIL2Q969S2 332 aa19.51■□□□□ 0.71
CCS-208ENST00000533244 RERGQ96A58 199 aaPredicted RBP19.51■□□□□ 0.71
CCS-208ENST00000533244 FKBP10Q96AY3 582 aa19.51■□□□□ 0.71
CCS-208ENST00000533244 TMEM79Q9BSE2 394 aa19.51■□□□□ 0.71
CCS-208ENST00000533244 NMRAL1Q9HBL8 299 aa19.51■□□□□ 0.71
CCS-208ENST00000533244 IFT80Q9P2H3 777 aaPredicted RBP19.51■□□□□ 0.71
CCS-208ENST00000533244 ZNF180Q9UJW8 692 aa19.51■□□□□ 0.71
CCS-208ENST00000533244 ACOT9Q9Y305 439 aa19.51■□□□□ 0.71
CCS-208ENST00000533244 A0A087X1B8 175 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 TXNDC9O14530 226 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 RIPK2O43353 540 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 CD63P08962 238 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 MYBL2P10244 700 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 TNFRSF8P28908 595 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 KCNC1P48547 511 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 SERPINB8P50452 374 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 SERPINB9P50453 376 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 PMS2P54278 862 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 TAF1BQ53T94 588 aaPredicted RBP19.5■□□□□ 0.71
CCS-208ENST00000533244 TCAIMQ8N3R3 496 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 DTWD1Q8N5C7 304 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 DCAKDQ8WVC6 231 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 SLC5A11Q8WWX8 675 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 ATOH8Q96SQ7 321 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 SLC26A1Q9H2B4 701 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 EPB41L4BQ9H329 900 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 POLHQ9Y253 713 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 SLC22A14Q9Y267 594 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 PADI2Q9Y2J8 665 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 KALRNO60229 2985 aa19.5■□□□□ 0.71
CCS-208ENST00000533244 CCDC189A1A4V9 331 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 CDC14CA4D256 554 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 TAPBPO15533 448 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 ALBP02768 609 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 TFEBP19484 476 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 BCL6P41182 706 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 CCR8P51685 355 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 IRF9Q00978 393 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 SLC9A5Q14940 896 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 DEFB109BQ30KR1 87 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 C18orf21Q32NC0 220 aaPredicted RBP19.49■□□□□ 0.71
CCS-208ENST00000533244 CATSPEREQ5SY80 951 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 FAM69BQ5VUD6 431 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 MLIPQ5VWP3 458 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 PRMT9Q6P2P2 845 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 OVCH1Q7RTY7 1134 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 GSPT2Q8IYD1 628 aaKnown RBP19.49■□□□□ 0.71
CCS-208ENST00000533244 EXD3Q8N9H8 876 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 UHMK1Q8TAS1 419 aaKnown RBP19.49■□□□□ 0.71
CCS-208ENST00000533244 STAG3L4Q8TBR4 150 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 KCTD4Q8WVF5 259 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.49■□□□□ 0.71
CCS-208ENST00000533244 SLC39A7Q92504 469 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 NXNL1Q96CM4 212 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 TM4SF19Q96DZ7 209 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 MVB12AQ96EY5 273 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 ALG9Q9H6U8 611 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 PELI2Q9HAT8 420 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 NDOR1Q9UHB4 597 aa19.49■□□□□ 0.71
CCS-208ENST00000533244 A0A096LPK6 155 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 FEZF1A0PJY2 475 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 NCF1BA6NI72 391 aaPredicted RBP19.48■□□□□ 0.71
CCS-208ENST00000533244 NCF1CA8MVU1 366 aaPredicted RBP19.48■□□□□ 0.71
CCS-208ENST00000533244 LCMT2O60294 686 aaKnown RBP19.48■□□□□ 0.71
CCS-208ENST00000533244 KERAO60938 352 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 IPO13O94829 963 aaKnown RBP19.48■□□□□ 0.71
CCS-208ENST00000533244 PIM1P11309 404 aaPredicted RBP19.48■□□□□ 0.71
CCS-208ENST00000533244 NCF1P14598 390 aaPredicted RBP19.48■□□□□ 0.71
CCS-208ENST00000533244 CNTFP26441 200 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 GCAP28676 217 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 GRK3P35626 688 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 GDF5P43026 501 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 MSH2P43246 934 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 SULT1C3Q6IMI6 304 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 MFSD9Q8NBP5 474 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 OR2Y1Q8NGV0 311 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 RHEBL1Q8TAI7 183 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 THAP4Q8WY91 577 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 CABS1Q96KC9 395 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 WDR54Q9H977 334 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 GPN3Q9UHW5 284 aaPredicted RBP19.48■□□□□ 0.71
CCS-208ENST00000533244 PTBP2Q9UKA9 531 aaKnown RBP19.48■□□□□ 0.71
CCS-208ENST00000533244 TLK1Q9UKI8 766 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 RNF112Q9ULX5 631 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 DYRK1BQ9Y463 629 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 KCNMB2Q9Y691 235 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 KCNE2Q9Y6J6 123 aa19.48■□□□□ 0.71
CCS-208ENST00000533244 TRBC2A0A5B9 178 aa19.47■□□□□ 0.71
CCS-208ENST00000533244 ESPNB1AK53 854 aa19.47■□□□□ 0.71
CCS-208ENST00000533244 TYK2P29597 1187 aa19.47■□□□□ 0.71
CCS-208ENST00000533244 CCR10P46092 362 aa19.47■□□□□ 0.71
CCS-208ENST00000533244 OR1D4P47884 311 aa19.47■□□□□ 0.71
CCS-208ENST00000533244 SNRPNP63162 240 aaKnown RBP19.47■□□□□ 0.71
CCS-208ENST00000533244 REEP5Q00765 189 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms