RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 CTSLP07711 333 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 ABCB1P08183 1280 aaPredicted RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 CEBPBP17676 345 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 ITGB6P18564 788 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 SDC1P18827 310 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 OXTRP30559 389 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 S100A3P33764 101 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 RPL3P39023 403 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 CAPGP40121 348 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 MAGEA2P43356 314 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 GSTM5P46439 218 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 ALDH3B2P48448 385 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 ALDH3A2P51648 485 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 PFN3P60673 137 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 MYBPC1Q00872 1141 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 IRF8Q02556 426 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 HSPA14Q0VDF9 509 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 MERTKQ12866 999 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 LAPTM5Q13571 262 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 MSMPQ1L6U9 139 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 C18orf21Q32NC0 220 aaPredicted RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 FAM174BQ3ZCQ3 159 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 SYTL3Q4VX76 610 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 SPIN4Q56A73 249 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 FBXO48Q5FWF7 155 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 SPANXN4Q5MJ08 99 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 RNF220Q5VTB9 566 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 FOXB2Q5VYV0 432 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 NEK5Q6P3R8 708 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 GALNT18Q6P9A2 607 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 SLC2A7Q6PXP3 512 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 SUSD1Q6UWL2 747 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 UNC5DQ6UXZ4 953 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 Q6ZVL8 140 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 USP51Q70EK9 711 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 ERN2Q76MJ5 926 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 PARS2Q7L3T8 475 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 LPCAT2Q7L5N7 544 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 ZNF438Q7Z4V0 828 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 DSG4Q86SJ6 1040 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 PATL1Q86TB9 770 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 SERPINA11Q86U17 422 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 GPR180Q86V85 440 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 ATCAYQ86WG3 371 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 SPPL2CQ8IUH8 684 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 MICU2Q8IYU8 434 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 SNX31Q8N9S9 440 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 TERB1Q8NA31 727 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 ITFG1Q8TB96 612 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 NELL1Q92832 810 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 BIRC7Q96CA5 298 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 DGCR14Q96DF8 476 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 RMND5BQ96G75 393 aaPredicted RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 ZNF764Q96H86 408 aaPredicted RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 REXO5Q96IC2 774 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 CNDP2Q96KP4 475 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 CNBD2Q96M20 576 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 RNF145Q96MT1 663 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 ZNF583Q96ND8 569 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 TMEM74Q96NL1 305 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 OR52E6Q96RD3 313 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 CDCA3Q99618 268 aaPredicted RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 CIB1Q99828 191 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 CPPED1Q9BRF8 314 aaPredicted RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 EFCAB11Q9BUY7 163 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 RIOK2Q9BVS4 552 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 PITHD1Q9GZP4 211 aaPredicted RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 PAIP1Q9H074 479 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 RBM38Q9H0Z9 239 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 ABCG8Q9H221 673 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 KAT8Q9H7Z6 458 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 SFXN1Q9H9B4 322 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 CLK4Q9HAZ1 481 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 IL1RL2Q9HB29 575 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 SERHLQ9NQF3 203 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 DDX18Q9NVP1 670 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 DZANK1Q9NVP4 752 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 SMPD3Q9NY59 655 aaPredicted RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 UBAP1Q9NZ09 502 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 USE1Q9NZ43 259 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 GDE1Q9NZC3 331 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 VAPAQ9P0L0 249 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 DNAJB9Q9UBS3 223 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 EGFL7Q9UHF1 273 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 SUFUQ9UMX1 484 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 AURKCQ9UQB9 309 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 WBP11Q9Y2W2 641 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 MRPS23Q9Y3D9 190 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 PRRC2BQ5JSZ5 2229 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 C2orf16Q68DN1 1984 aa5.53□□□□□ -1.52
ATPAF1-210ENST00000532925 A0A087WXM4 84 aa5.52□□□□□ -1.53
ATPAF1-210ENST00000532925 RNF103-CHMP3A0A140T963 221 aa5.52□□□□□ -1.53
ATPAF1-210ENST00000532925 TTC34A8MYJ7 566 aa5.52□□□□□ -1.53
ATPAF1-210ENST00000532925 EVPLLA8MZ36 301 aa5.52□□□□□ -1.53
ATPAF1-210ENST00000532925 C1QTNF3-AMACRE9PGA6 284 aa5.52□□□□□ -1.53
ATPAF1-210ENST00000532925 DLGAP1O14490 977 aa5.52□□□□□ -1.53
ATPAF1-210ENST00000532925 SOCS2O14508 198 aa5.52□□□□□ -1.53
ATPAF1-210ENST00000532925 FFAR3O14843 346 aa5.52□□□□□ -1.53
ATPAF1-210ENST00000532925 GPR42O15529 346 aa5.52□□□□□ -1.53
ATPAF1-210ENST00000532925 DNAJB5O75953 348 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms