RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 SGPP1Q9BX95 441 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 ZNF552Q9H707 407 aaPredicted RBP10.59□□□□□ -0.71
NR1H3-230ENST00000527949 CCDC177Q9NQR7 707 aaPredicted RBP10.59□□□□□ -0.71
NR1H3-230ENST00000527949 MOCS1Q9NZB8 636 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 STOX2Q9P2F5 926 aaPredicted RBP10.59□□□□□ -0.71
NR1H3-230ENST00000527949 ZC3H7BQ9UGR2 993 aaKnown RBP10.59□□□□□ -0.71
NR1H3-230ENST00000527949 NOVA2Q9UNW9 492 aaKnown RBP10.59□□□□□ -0.71
NR1H3-230ENST00000527949 PDE10AQ9Y233 779 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 ANKRD17O75179 2603 aaKnown RBP10.58□□□□□ -0.72
NR1H3-230ENST00000527949 ABCA12Q86UK0 2595 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 FAM187AA6NFU0 413 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 EIF3HO15372 352 aaKnown RBP eCLIP10.58□□□□□ -0.72
NR1H3-230ENST00000527949 MED26O95402 600 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 ZGLP1P0C6A0 271 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 FBLP22087 321 aaKnown RBP10.58□□□□□ -0.72
NR1H3-230ENST00000527949 FDXRP22570 491 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 SLC26A3P40879 764 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 ELK3P41970 407 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 ITGA8P53708 1063 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 IL2P60568 153 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 RPS15AP62244 130 aaKnown RBP10.58□□□□□ -0.72
NR1H3-230ENST00000527949 YBX1P67809 324 aaKnown RBP10.58□□□□□ -0.72
NR1H3-230ENST00000527949 NDUFA9Q16795 377 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 TUBB8Q3ZCM7 444 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 PRR30Q53SZ7 412 aaPredicted RBP10.58□□□□□ -0.72
NR1H3-230ENST00000527949 PRAMEF13Q5VWM6 474 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 ATG9BQ674R7 924 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 PAQR3Q6TCH7 311 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 KIRREL2Q6UWL6 708 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 LCTLQ6UWM7 567 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 CYS1Q717R9 158 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 SLC26A11Q86WA9 606 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 SRRM1Q8IYB3 904 aaKnown RBP10.58□□□□□ -0.72
NR1H3-230ENST00000527949 ABHD11Q8NFV4 315 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 EEF1AKMT1Q8WVE0 214 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 ATL1Q8WXF7 558 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 MIEF2Q96C03 454 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 WDR83Q9BRX9 315 aaKnown RBP10.58□□□□□ -0.72
NR1H3-230ENST00000527949 HAUS8Q9BT25 410 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 MFRPQ9BY79 579 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 TRIM54Q9BYV2 358 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 PHACTR1Q9C0D0 580 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 ILKAPQ9H0C8 392 aaPredicted RBP10.58□□□□□ -0.72
NR1H3-230ENST00000527949 MKKSQ9NPJ1 570 aaPredicted RBP10.58□□□□□ -0.72
NR1H3-230ENST00000527949 NSMCE4AQ9NXX6 385 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 CTSFQ9UBX1 484 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 FBXL4Q9UKA2 621 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 RUVBL1Q9Y265 456 aaKnown RBP10.58□□□□□ -0.72
NR1H3-230ENST00000527949 VWA7Q9Y334 891 aa10.58□□□□□ -0.72
NR1H3-230ENST00000527949 TEP1Q99973 2627 aaKnown RBP10.57□□□□□ -0.72
NR1H3-230ENST00000527949 H0YIG0 161 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 TTI1O43156 1089 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 NRP2O60462 931 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 HPP00738 406 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 HIST1H2AGP0C0S8 130 aaPredicted RBP10.57□□□□□ -0.72
NR1H3-230ENST00000527949 HIST1H2ADP20671 130 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 OR1D4P47884 311 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 CDKN2DP55273 166 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 TBPL1P62380 186 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 AP2B1P63010 937 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 KLC1Q07866 573 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 MGAT5Q09328 741 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 RBBP7Q16576 425 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 RBM20Q5T481 1227 aaKnown RBP10.57□□□□□ -0.72
NR1H3-230ENST00000527949 THEMIS2Q5TEJ8 643 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 DUPD1Q68J44 220 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 AGTRAPQ6RW13 159 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 Q6ZS92 163 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 STRA8Q7Z7C7 330 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 C17orf64Q86WR6 236 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 KLHL7Q8IXQ5 586 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 ST6GALNAC3Q8NDV1 305 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 OR11G2Q8NGC1 345 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 OR56A3Q8NH54 315 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 PPP4R1Q8TF05 950 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.57□□□□□ -0.72
NR1H3-230ENST00000527949 MARVELD3Q96A59 401 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 FBXL8Q96CD0 374 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 TM4SF19Q96DZ7 209 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 LINGO1Q96FE5 620 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 CABS1Q96KC9 395 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 HIST1H2AHQ96KK5 128 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 CAPZA3Q96KX2 299 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 NDNQ99608 321 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 BARD1Q99728 777 aaKnown RBP10.57□□□□□ -0.72
NR1H3-230ENST00000527949 HIST1H2AJQ99878 128 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 MCMBPQ9BTE3 642 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 H2AFJQ9BTM1 129 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 CRB3Q9BUF7 120 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 DRC3Q9H069 523 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 POPDC3Q9HBV1 291 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 ASF1BQ9NVP2 202 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 WHRNQ9P202 907 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 TSR3Q9UJK0 312 aaKnown RBP10.57□□□□□ -0.72
NR1H3-230ENST00000527949 CDC23Q9UJX2 597 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 PYCARDQ9ULZ3 195 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 CHMP2BQ9UQN3 213 aa10.57□□□□□ -0.72
NR1H3-230ENST00000527949 COPG1Q9Y678 874 aaKnown RBP10.57□□□□□ -0.72
NR1H3-230ENST00000527949 PRRC2CQ9Y520 2896 aaKnown RBP10.56□□□□□ -0.72
NR1H3-230ENST00000527949 LOC102723996A0A087X1L8 192 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms