RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 KCNJ9Q92806 393 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 HAS2Q92819 552 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 ZNF669Q96BR6 464 aaPredicted RBP10.02□□□□□ -0.81
CPSF1-203ENST00000527916 SLC26A1Q9H2B4 701 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 FAM114A2Q9NRY5 505 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 SLC22A11Q9NSA0 550 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 GALPQ9UBC7 116 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 SNX12Q9UMY4 172 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 KLHL20Q9Y2M5 609 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 DHRS7Q9Y394 339 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 MRPS2Q9Y399 296 aaKnown RBP10.02□□□□□ -0.81
CPSF1-203ENST00000527916 OR2A25A4D2G3 310 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 CTAGE9A4FU28 777 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 ZNF839A8K0R7 811 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 C19orf84I3L1E1 186 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 GFYI3L273 518 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 CTSVO60911 334 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 HPP00738 406 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 CATP04040 527 aaKnown RBP10.01□□□□□ -0.81
CPSF1-203ENST00000527916 MPC1LP0DKB6 136 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 ENO3P13929 434 aaPredicted RBP10.01□□□□□ -0.81
CPSF1-203ENST00000527916 ACPPP15309 386 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 TCP1P17987 556 aaKnown RBP10.01□□□□□ -0.81
CPSF1-203ENST00000527916 FDXRP22570 491 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 CMPK1P30085 196 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 KIR3DL1P43629 444 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 BDKRB1P46663 353 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 CARSP49589 748 aaKnown RBP10.01□□□□□ -0.81
CPSF1-203ENST00000527916 TERF1P54274 439 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 EMP3P54852 163 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 ADORA2A-AS1P86434 159 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 Q0VFX4 171 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 CTBP1Q13363 440 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 KCTD19Q17RG1 926 aaPredicted RBP10.01□□□□□ -0.81
CPSF1-203ENST00000527916 RNASEH2BQ5TBB1 312 aaKnown RBP10.01□□□□□ -0.81
CPSF1-203ENST00000527916 ZNF470Q6ECI4 717 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 FBXO42Q6P3S6 717 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 ZNF549Q6P9A3 640 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 CYHR1Q6ZMK1 362 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 TMEM151BQ8IW70 566 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 MMP21Q8N119 569 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 AGGF1Q8N302 714 aaeCLIP10.01□□□□□ -0.81
CPSF1-203ENST00000527916 TTC29Q8NA56 475 aaPredicted RBP10.01□□□□□ -0.81
CPSF1-203ENST00000527916 GABPB2Q8TAK5 448 aaPredicted RBP10.01□□□□□ -0.81
CPSF1-203ENST00000527916 ASB11Q8WXH4 323 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 SMPDL3AQ92484 453 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 MAGED4Q96JG8 741 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 SPSB2Q99619 263 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 SELENOSQ9BQE4 189 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 NAT9Q9BTE0 207 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 CCDC68Q9H2F9 335 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 SOX17Q9H6I2 414 aaPredicted RBP10.01□□□□□ -0.81
CPSF1-203ENST00000527916 ZNF160Q9HCG1 818 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 CUTCQ9NTM9 273 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 PLA2G3Q9NZ20 509 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 PTGFRNQ9P2B2 879 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 CIDEBQ9UHD4 219 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 PCYOX1Q9UHG3 505 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 FBXO5Q9UKT4 447 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 RUVBL2Q9Y230 463 aaKnown RBP10.01□□□□□ -0.81
CPSF1-203ENST00000527916 MED16Q9Y2X0 877 aa10.01□□□□□ -0.81
CPSF1-203ENST00000527916 ZNF469Q96JG9 3925 aaPredicted RBP10.01□□□□□ -0.81
CPSF1-203ENST00000527916 GTF3C1Q12789 2109 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 HYKKA2RU49 373 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 FAM221AA4D161 298 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 ARHGEF33A8MVX0 844 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 GOLGA8MH3BSY2 632 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 MAP2K7O14733 419 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 TTC4O95801 387 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 MLYCDO95822 493 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 DRD2P14416 443 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 MST1P26927 711 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 SKIV2L2P42285 1042 aaKnown RBP10□□□□□ -0.81
CPSF1-203ENST00000527916 PRDX1Q06830 199 aaKnown RBP10□□□□□ -0.81
CPSF1-203ENST00000527916 FASTKQ14296 549 aaKnown RBP10□□□□□ -0.81
CPSF1-203ENST00000527916 PPP1R7Q15435 360 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 EEF1AKMT2Q5JPI9 291 aaKnown RBP10□□□□□ -0.81
CPSF1-203ENST00000527916 WASHC2DQ5SRD0 308 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 LRRC8EQ6NSJ5 796 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 UGT3A1Q6NUS8 523 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 PRMT9Q6P2P2 845 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 MEX3BQ6ZN04 569 aaKnown RBP10□□□□□ -0.81
CPSF1-203ENST00000527916 SHISA6Q6ZSJ9 500 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 RNF44Q7L0R7 432 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 TAX1BP1Q86VP1 789 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 DENND6AQ8IWF6 608 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 PKP4Q99569 1192 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 MIPEPQ99797 713 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 ZFYVE21Q9BQ24 234 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 FAM167BQ9BTA0 163 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 CRB3Q9BUF7 120 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 TMUB1Q9BVT8 246 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 C20orf96Q9NUD7 363 aaPredicted RBP10□□□□□ -0.81
CPSF1-203ENST00000527916 UTP6Q9NYH9 597 aaKnown RBP10□□□□□ -0.81
CPSF1-203ENST00000527916 MAD1L1Q9Y6D9 718 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 AKAP6Q13023 2319 aa10□□□□□ -0.81
CPSF1-203ENST00000527916 PRRC2AP48634 2157 aaKnown RBP9.99□□□□□ -0.81
CPSF1-203ENST00000527916 INTS1Q8N201 2190 aaKnown RBP9.99□□□□□ -0.81
CPSF1-203ENST00000527916 NSG1A0A0A6YYJ2 146 aa9.99□□□□□ -0.81
CPSF1-203ENST00000527916 VSTM2BA6NLU5 285 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms