RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 TBC1D19Q8N5T2 526 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 METTL27Q8N6F8 245 aaPredicted RBP19.63■□□□□ 0.73
VPS28-206ENST00000526734 CAMKVQ8NCB2 501 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 FDCSPQ8NFU4 85 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 ABHD11Q8NFV4 315 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 STT3BQ8TCJ2 826 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 C16orf45Q96MC5 204 aaPredicted RBP19.63■□□□□ 0.73
VPS28-206ENST00000526734 SMAD5Q99717 465 aaKnown RBP19.63■□□□□ 0.73
VPS28-206ENST00000526734 CRB3Q9BUF7 120 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 GPAMQ9HCL2 828 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 ATP13A2Q9NQ11 1180 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 MAU2Q9Y6X3 613 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 TCRBV9S1A1TA0A576 114 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 FAM159BA6NKW6 160 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 MED26O95402 600 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 PDGFAP04085 211 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 NPPBP16860 134 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 SAT1P21673 171 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 STX2P32856 288 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 GP5P40197 560 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 AIMP2Q13155 320 aaKnown RBP19.62■□□□□ 0.73
VPS28-206ENST00000526734 NAB1Q13506 487 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 MYBPC3Q14896 1274 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 PPP1R3AQ16821 1122 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 HKDC1Q2TB90 917 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 C3orf62Q6ZUJ4 267 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 GALNT16Q8N428 558 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 ARHGEF39Q8N4T4 335 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 FBXO25Q8TCJ0 367 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 SARGQ9BW04 601 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 CLMPQ9H6B4 373 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 MKKSQ9NPJ1 570 aaPredicted RBP19.62■□□□□ 0.73
VPS28-206ENST00000526734 MAP4K5Q9Y4K4 846 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 HS3ST3B1Q9Y662 390 aa19.62■□□□□ 0.73
VPS28-206ENST00000526734 H0YIG0 161 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 URI1O94763 535 aaPredicted RBP19.61■□□□□ 0.73
VPS28-206ENST00000526734 ZGLP1P0C6A0 271 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 SLC26A3P40879 764 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 AVPR1BP47901 424 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 HNMTP50135 292 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 CCR8P51685 355 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 KCNC4Q03721 635 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 TUBB8Q3ZCM7 444 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 TMEM207Q6UWW9 146 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 CEP128Q6ZU80 1094 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 PLD3Q8IV08 490 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 TM9SF4Q92544 642 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 ALKBH8Q96BT7 664 aaKnown RBP19.61■□□□□ 0.73
VPS28-206ENST00000526734 MMABQ96EY8 250 aaPredicted RBP19.61■□□□□ 0.73
VPS28-206ENST00000526734 GPR22Q99680 433 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 RBBP8Q99708 897 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 NUDT9Q9BW91 350 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 TRIM4Q9C037 500 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 TGIF2Q9GZN2 237 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 SOX17Q9H6I2 414 aaPredicted RBP19.61■□□□□ 0.73
VPS28-206ENST00000526734 SMYD2Q9NRG4 433 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 TRPC4Q9UBN4 977 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 CTNNAL1Q9UBT7 734 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 FBXL4Q9UKA2 621 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 OARD1Q9Y530 152 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 PCM1Q15154 2024 aa19.61■□□□□ 0.73
VPS28-206ENST00000526734 KIF2AO00139 706 aaPredicted RBP19.6■□□□□ 0.73
VPS28-206ENST00000526734 SOCS6O14544 535 aa19.6■□□□□ 0.73
VPS28-206ENST00000526734 P2RX6O15547 441 aa19.6■□□□□ 0.73
VPS28-206ENST00000526734 NSA2O95478 260 aaKnown RBP19.6■□□□□ 0.73
VPS28-206ENST00000526734 GUCA1CO95843 209 aa19.6■□□□□ 0.73
VPS28-206ENST00000526734 CYC1P08574 325 aa19.6■□□□□ 0.73
VPS28-206ENST00000526734 SLC35G6P0C7Q6 338 aa19.6■□□□□ 0.73
VPS28-206ENST00000526734 CDH1P12830 882 aa19.6■□□□□ 0.73
VPS28-206ENST00000526734 KLC1Q07866 573 aa19.6■□□□□ 0.73
VPS28-206ENST00000526734 IRAK1BP1Q5VVH5 260 aa19.6■□□□□ 0.73
VPS28-206ENST00000526734 ZDHHC24Q6UX98 284 aa19.6■□□□□ 0.73
VPS28-206ENST00000526734 FRA10AC1Q70Z53 315 aa19.6■□□□□ 0.73
VPS28-206ENST00000526734 VN1R4Q7Z5H5 301 aa19.6■□□□□ 0.73
VPS28-206ENST00000526734 OR4K1Q8NGD4 311 aa19.6■□□□□ 0.73
VPS28-206ENST00000526734 DERL2Q9GZP9 239 aa19.6■□□□□ 0.73
VPS28-206ENST00000526734 SYNPO2LQ9H987 977 aa19.6■□□□□ 0.73
VPS28-206ENST00000526734 TRBC2A0A5B9 178 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 A6NL46 340 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 FOXS1O43638 330 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 STMN1P16949 149 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 SPRP35270 261 aaPredicted RBP19.59■□□□□ 0.73
VPS28-206ENST00000526734 MAGEA4P43358 317 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 GPX6P59796 221 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 CSHL1Q14406 222 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 USP10Q14694 798 aaKnown RBP19.59■□□□□ 0.73
VPS28-206ENST00000526734 GRTP1Q5TC63 336 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 NIPAL1Q6NVV3 410 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 KIRREL2Q6UWL6 708 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 ASPGQ86U10 573 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 CCDC25Q86WR0 208 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 CEP97Q8IW35 865 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 AMER3Q8N944 861 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 MFSD9Q8NBP5 474 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 MNS1Q8NEH6 495 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 TM4SF19Q96DZ7 209 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 C3orf18Q9UK00 162 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 DYRK1BQ9Y463 629 aa19.59■□□□□ 0.73
VPS28-206ENST00000526734 HEATR5BQ9P2D3 2071 aa19.58■□□□□ 0.73
VPS28-206ENST00000526734 A0A0A6YYC8 382 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms