RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 IGSF11Q5DX21 431 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 OR4A47Q6IF82 309 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 EMBQ6PCB8 327 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 SLC24A5Q71RS6 500 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 RPAINQ86UA6 219 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 SMAP1Q8IYB5 467 aaPredicted RBP1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 C1orf131Q8NDD1 294 aaKnown RBP1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 OR10Q1Q8NGQ4 319 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 RPLP0P6Q8NHW5 317 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 KCNE4Q8WWG9 221 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 SLAMF9Q96A28 289 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 FAM71F1Q96KD3 344 aaPredicted RBP1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 MS4A10Q96PG2 267 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 ITPAQ9BY32 194 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 DNAI2Q9GZS0 605 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 SMARCAD1Q9H4L7 1026 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 MARCH7Q9H992 704 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 IL1RAPQ9NPH3 570 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 HACD3Q9P035 362 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 STK26Q9P289 416 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 IL17BQ9UHF5 180 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 WDR83OSQ9Y284 106 aa1.79□□□□□ -2.12
ECHDC1-219ENST00000526299 ZNF749O43361 778 aa1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 MTRF1O75570 445 aaKnown RBP1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 IRF2P14316 349 aa1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 DNASE1P24855 282 aa1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 MAPK12P53778 367 aa1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 CYLC2Q14093 348 aaPredicted RBP1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 NHLRC3Q5JS37 347 aa1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 ZNF506Q5JVG8 444 aa1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 MFSD12Q6NUT3 480 aa1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 TIFABQ6ZNK6 161 aa1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 ADGRF2Q8IZF7 708 aa1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 NFAM1Q8NET5 270 aaPredicted RBP1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 SPDL1Q96EA4 605 aa1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 CFAP57Q96MR6 1250 aa1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 C7orf26Q96N11 449 aa1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 CDCA3Q99618 268 aaPredicted RBP1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 MMP27Q9H306 513 aa1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 ORC3Q9UBD5 711 aaPredicted RBP1.78□□□□□ -2.12
ECHDC1-219ENST00000526299 TDRD9Q8NDG6 1382 aaKnown RBP1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 ZNF644Q9H582 1327 aaPredicted RBP1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 TRGV8A0A0C4DH27 118 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 TCP11X1B4DZS4 312 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 F8VVB4 439 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 F8VWA3 439 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 PAPSS1O43252 624 aaPredicted RBP1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 RPLP0P05388 317 aaKnown RBP1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 CD1EP15812 388 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 ELK1P19419 428 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 EDNRAP25101 427 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 MPZP25189 248 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 CD27P26842 260 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 CETN2P41208 172 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 ALDH3A2P51648 485 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 SRSF9Q13242 221 aaKnown RBP eCLIP1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 G3BP1Q13283 466 aaKnown RBP eCLIP1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 IRF3Q14653 427 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 OPCMLQ14982 345 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 DUSP5Q16690 384 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 SLC22A6Q4U2R8 563 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 SNX30Q5VWJ9 437 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 HAUS3Q68CZ6 603 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 PCYOX1LQ8NBM8 494 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 U2AF1L4Q8WU68 220 aaKnown RBP1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 ZNF799Q96GE5 643 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 SEPT11Q9NVA2 429 aaKnown RBP1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 CLEC4EQ9ULY5 219 aa1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 MRPS18CQ9Y3D5 142 aaKnown RBP1.77□□□□□ -2.13
ECHDC1-219ENST00000526299 SPATA31D1Q6ZQQ2 1576 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 KLF18A0A0U1RQI7 1052 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 A0A1B0GVC2 190 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 RTCAO00442 366 aaKnown RBP1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 SRPX2O60687 465 aaPredicted RBP1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 CYTIPO60759 359 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 AGR2O95994 175 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 DANCRP0C864 163 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 CHMP24386 653 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 MAPK4P31152 587 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 GPR183P32249 361 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 GARSP41250 739 aaKnown RBP1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 PNLIPRP2P54317 469 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 CDH13P55290 713 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 ABCE1P61221 599 aaKnown RBP1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 SETQ01105 290 aaPredicted RBP1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 PRKG2Q13237 762 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 LTB4RQ15722 352 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 TMEM266Q2M3C6 531 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 ATP1A1-AS1Q5TC04 95 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 TMEM211Q6ICI0 200 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 PAMR1Q6UXH9 720 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 SLC22A15Q8IZD6 547 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 NOA1Q8NC60 698 aaKnown RBP1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 CCDC34Q96HJ3 373 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 TBATAQ96M53 351 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 PAFAH2Q99487 392 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 MAPKAP1Q9BPZ7 522 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 EBF4Q9BQW3 602 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 SLC26A6Q9BXS9 759 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 PRRG4Q9BZD6 226 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms