RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 SELENOSQ9BQE4 189 aa6.22□□□□□ -1.41
CD44-214ENST00000525211 PLCD4Q9BRC7 762 aa6.22□□□□□ -1.41
CD44-214ENST00000525211 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.22□□□□□ -1.41
CD44-214ENST00000525211 SPRTNQ9H040 489 aaPredicted RBP6.22□□□□□ -1.41
CD44-214ENST00000525211 RAB33BQ9H082 229 aa6.22□□□□□ -1.41
CD44-214ENST00000525211 SAP130Q9H0E3 1048 aa6.22□□□□□ -1.41
CD44-214ENST00000525211 SLC32A1Q9H598 525 aa6.22□□□□□ -1.41
CD44-214ENST00000525211 NOL11Q9H8H0 719 aaKnown RBP6.22□□□□□ -1.41
CD44-214ENST00000525211 AKIRIN1Q9H9L7 192 aaPredicted RBP6.22□□□□□ -1.41
CD44-214ENST00000525211 SEMA4BQ9NPR2 832 aaPredicted RBP6.22□□□□□ -1.41
CD44-214ENST00000525211 CCDC177Q9NQR7 707 aaPredicted RBP6.22□□□□□ -1.41
CD44-214ENST00000525211 FARSBQ9NSD9 589 aaKnown RBP6.22□□□□□ -1.41
CD44-214ENST00000525211 DNAJC11Q9NVH1 559 aa6.22□□□□□ -1.41
CD44-214ENST00000525211 OXSMQ9NWU1 459 aa6.22□□□□□ -1.41
CD44-214ENST00000525211 RNF11Q9Y3C5 154 aa6.22□□□□□ -1.41
CD44-214ENST00000525211 PCDHGA1Q9Y5H4 931 aa6.22□□□□□ -1.41
CD44-214ENST00000525211 PTGDR2Q9Y5Y4 395 aa6.22□□□□□ -1.41
CD44-214ENST00000525211 ACTL7BQ9Y614 415 aa6.22□□□□□ -1.41
CD44-214ENST00000525211 A0A0J9YVX5 310 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 TEX51A0A1B0GUA7 166 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 MED19A0JLT2 244 aaPredicted RBP6.21□□□□□ -1.42
CD44-214ENST00000525211 TLCD2A6NGC4 264 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 EFCAB7A8K855 629 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 TMEM233B4DJY2 109 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 STX16-NPEPL1H3BU86 382 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 K7EPI3 171 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 STX16O14662 325 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 FFAR3O14843 346 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 GPR42O15529 346 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 SH3BGRLO75368 114 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 KATNA1O75449 491 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 RASSF9O75901 435 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 WFS1O76024 890 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 IPO13O94829 963 aaKnown RBP6.21□□□□□ -1.42
CD44-214ENST00000525211 OR4F21O95013 312 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 ETHE1O95571 254 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 HIST1H2AGP0C0S8 130 aaPredicted RBP6.21□□□□□ -1.42
CD44-214ENST00000525211 MYL2P10916 166 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 NELFEP18615 380 aaKnown RBP6.21□□□□□ -1.42
CD44-214ENST00000525211 HIST1H2ADP20671 130 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 IMPDH1P20839 514 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 SERPINB3P29508 390 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 CCT5P48643 541 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 NEK2P51955 445 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 HERVK_113P63132 956 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 CYP4F2P78329 520 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 NFKB2Q00653 900 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 REEP5Q00765 189 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 ILF2Q12905 390 aaKnown RBP6.21□□□□□ -1.42
CD44-214ENST00000525211 CDC16Q13042 620 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 CHIT1Q13231 466 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 ILKQ13418 452 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 GTF2H2Q13888 395 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 SLBPQ14493 270 aaKnown RBP eCLIP6.21□□□□□ -1.42
CD44-214ENST00000525211 CDKL4Q5MAI5 379 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 THEMIS2Q5TEJ8 643 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 TTC19Q6DKK2 380 aaPredicted RBP6.21□□□□□ -1.42
CD44-214ENST00000525211 CAPN13Q6MZZ7 669 aaPredicted RBP6.21□□□□□ -1.42
CD44-214ENST00000525211 GTF2H2CQ6P1K8 395 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 KLC3Q6P597 504 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 NXPE4Q6UWF7 544 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 RBM44Q6ZP01 1051 aaKnown RBP6.21□□□□□ -1.42
CD44-214ENST00000525211 RIPOR1Q6ZS17 1223 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 TMPRSS7Q7RTY8 843 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 PRSS41Q7RTY9 318 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 PRSS42Q7Z5A4 293 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 CCDC91Q7Z6B0 441 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 TMPRSS11BQ86T26 416 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 PLXDC1Q8IUK5 500 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 D2HGDHQ8N465 521 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 AMER2Q8N7J2 671 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 CCNYL1Q8N7R7 359 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 AMER3Q8N944 861 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 CCDC63Q8NA47 563 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 SLC38A9Q8NBW4 561 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 ABHD11Q8NFV4 315 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 OR4F6Q8NGB9 312 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 OR4K1Q8NGD4 311 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 OR1L3Q8NH93 324 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 MAGEC3Q8TD91 643 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 SLC5A11Q8WWX8 675 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 L3HYPDHQ96EM0 354 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 HIST1H2AHQ96KK5 128 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 OR2A5Q96R48 311 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 RUFY1Q96T51 708 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 HBEGFQ99075 208 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 SORT1Q99523 831 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 HIST1H2AJQ99878 128 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 H2AFJQ9BTM1 129 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 C1QTNF3Q9BXJ4 246 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 ERVK-6Q9BXR3 956 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 TRIM54Q9BYV2 358 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 GRIP2Q9C0E4 1043 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 KLHL31Q9H511 634 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 ZNF768Q9H5H4 540 aaKnown RBP6.21□□□□□ -1.42
CD44-214ENST00000525211 STN1Q9H668 368 aaKnown RBP6.21□□□□□ -1.42
CD44-214ENST00000525211 SSU72Q9NP77 194 aaKnown RBP6.21□□□□□ -1.42
CD44-214ENST00000525211 MRPS30Q9NP92 439 aaKnown RBP6.21□□□□□ -1.42
CD44-214ENST00000525211 C1GALT1Q9NS00 363 aa6.21□□□□□ -1.42
CD44-214ENST00000525211 GEMIN8Q9NWZ8 242 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms