RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ERN1O75460 977 aaKnown RBP4.29□□□□□ -1.72
CD44-213ENST00000525209 OR5F1O95221 314 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 LUC7L3O95232 432 aaKnown RBP4.29□□□□□ -1.72
CD44-213ENST00000525209 VNN1O95497 513 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 C9P02748 559 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 HLA-DOAP06340 250 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 ALPIP09923 528 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 TMEM191BP0C7N4 346 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 PNMTP11086 282 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 ZNF37AP17032 561 aaPredicted RBP4.29□□□□□ -1.72
CD44-213ENST00000525209 CAPN2P17655 700 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 CD22P20273 847 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 MX1P20591 662 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 S1PR1P21453 382 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 MARCKSP29966 332 aaPredicted RBP4.29□□□□□ -1.72
CD44-213ENST00000525209 LIPAP38571 399 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 ETV5P41161 510 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 RPS5P46782 204 aaKnown RBP4.29□□□□□ -1.72
CD44-213ENST00000525209 ACADVLP49748 655 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 PPT1P50897 306 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 ANXA11P50995 505 aaKnown RBP4.29□□□□□ -1.72
CD44-213ENST00000525209 JAK3P52333 1124 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 ARHGDIAP52565 204 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 SLC37A1P57057 533 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 DSTNP60981 165 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 YWHAGP61981 247 aaKnown RBP eCLIP4.29□□□□□ -1.72
CD44-213ENST00000525209 RPS15P62841 145 aaKnown RBP4.29□□□□□ -1.72
CD44-213ENST00000525209 DLK1P80370 383 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 PRR5P85299 388 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 PPP2R2BQ00005 443 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 SLC34A1Q06495 639 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 NCBP1Q09161 790 aaKnown RBP4.29□□□□□ -1.72
CD44-213ENST00000525209 ANGPT1Q15389 498 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 GAGE13Q4V321 117 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 TEX44Q53QW1 395 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 DCAF6Q58WW2 860 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 TMEM63BQ5T3F8 832 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 GRTP1Q5TC63 336 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 TTC23Q5W5X9 447 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 LYSMD4Q5XG99 296 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 KRT40Q6A162 431 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 LCTLQ6UWM7 567 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 FAM159AQ6UWV7 190 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 SYT10Q6XYQ8 523 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 ZNF852Q6ZMS4 543 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 RNF207Q6ZRF8 634 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 TPGS1Q6ZTW0 290 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 KCTD8Q6ZWB6 473 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 STXBP4Q6ZWJ1 553 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 SLC24A5Q71RS6 500 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 SLC16A9Q7RTY1 509 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 TBC1D26Q86UD7 250 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 HAPLN4Q86UW8 402 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 ANKRD46Q86W74 232 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 SPPL2CQ8IUH8 684 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 MAPKAPK5Q8IW41 473 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 ARHGAP24Q8N264 748 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 FAM109AQ8N4B1 249 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 ZCCHC9Q8N567 271 aaKnown RBP4.29□□□□□ -1.72
CD44-213ENST00000525209 ZNF611Q8N823 705 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 ANKFN1Q8N957 763 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 OR4K14Q8NGD5 310 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 OR4A16Q8NH70 328 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 ZFP28Q8NHY6 868 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 NDNFQ8TB73 568 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 FAM81AQ8TBF8 368 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 TRMT10AQ8TBZ6 339 aaKnown RBP4.29□□□□□ -1.72
CD44-213ENST00000525209 PIGKQ92643 395 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 CTHRC1Q96CG8 243 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 HARBI1Q96MB7 349 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 RAB40CQ96S21 281 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 NPAS2Q99743 824 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 RTP3Q9BQQ7 232 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 SGPP1Q9BX95 441 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 WWTR1Q9GZV5 400 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 OR52A5Q9H2C5 316 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 CUEDC2Q9H467 287 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 FBXO44Q9H4M3 255 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 ZNF768Q9H5H4 540 aaKnown RBP4.29□□□□□ -1.72
CD44-213ENST00000525209 BCAS3Q9H6U6 928 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 GEMIN7Q9H840 131 aaKnown RBP4.29□□□□□ -1.72
CD44-213ENST00000525209 PDGFCQ9NRA1 345 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 ZDHHC18Q9NUE0 388 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 DDX28Q9NUL7 540 aaKnown RBP4.29□□□□□ -1.72
CD44-213ENST00000525209 GCNT4Q9P109 453 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 CTTNBP2NLQ9P2B4 639 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 HMGXB4Q9UGU5 601 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 RNF150Q9ULK6 438 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 ICKQ9UPZ9 632 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 B3GNT3Q9Y2A9 372 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 PPIL1Q9Y3C6 166 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 SNX11Q9Y5W9 270 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 MYO5CQ9NQX4 1742 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 C9orf84Q5VXU9 1444 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 C3P01024 1663 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 TRAV26-1A0A087WT03 109 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 A0A087WUV0 522 aaPredicted RBP4.28□□□□□ -1.72
CD44-213ENST00000525209 KANSL1LA0AUZ9 987 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 TMEM129A0AVI4 362 aa4.28□□□□□ -1.72
CD44-213ENST00000525209 TMEM89A2RUT3 159 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms