RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 TRBC2A0A5B9 178 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 FEZF1A0PJY2 475 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 OR2A25A4D2G3 310 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 SLC9B1P1A6NJY1 282 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 MANBAO00462 879 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 HDAC3O15379 428 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 KIF1CO43896 1103 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 NRP2O60462 931 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 TGDSO95455 350 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 C9P02748 559 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 EZRP15311 586 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 ST6GAL1P15907 406 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 DRD4P21917 467 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 LIMK1P53667 647 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 PHEXP78562 749 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 CFHR1Q03591 330 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 RBBP5Q15291 538 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 CLPPQ16740 277 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 SGO1Q5FBB7 561 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 SNAP47Q5SQN1 464 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 CACHD1Q5VU97 1274 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 FRG2Q64ET8 278 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 FCRL6Q6DN72 434 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 PLD3Q8IV08 490 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 DDIASQ8IXT1 998 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 LAS2Q8IYD9 372 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 CARFQ8N187 725 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 ZNF740Q8NDX6 193 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 OR7G3Q8NG95 312 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 SELENOMQ8WWX9 145 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 CCT6BQ92526 530 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 THOC1Q96FV9 657 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 TRAPPC9Q96Q05 1148 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 FRG2BQ96QU4 278 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 RABEP2Q9H5N1 569 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 PFDN4Q9NQP4 134 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 SOHLH2Q9NX45 425 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 TMEM9Q9P0T7 183 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 RAPGEFL1Q9UHV5 662 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 BTRCQ9Y297 605 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 DNAJC15Q9Y5T4 150 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 USH1CQ9Y6N9 552 aa15.2■□□□□ 0.02
TSPAN4-213ENST00000524895 TRPC5OSA6NMA1 111 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 PIP5K1BO14986 540 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 CASC3O15234 703 aaKnown RBP15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 MAP3K7O43318 606 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 OR1F1O43749 312 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 ULK1O75385 1050 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 ARL4DP49703 201 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 HTR6P50406 440 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 RPS15AP62244 130 aaKnown RBP15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 CBX1P83916 185 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 CYP4F3Q08477 520 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 DDX39BQ13838 428 aaKnown RBP15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 SPIDRQ14159 915 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 UGT3A2Q3SY77 523 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 CCDC157Q569K6 752 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 C10orf62Q5T681 223 aaPredicted RBP15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 CGB2Q6NT52 195 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 TMEM71Q6P5X7 295 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 PRSS42Q7Z5A4 293 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 PIP4P1Q86T03 277 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 OR4D9Q8NGE8 314 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 WDR48Q8TAF3 677 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 MTFMTQ96DP5 389 aaKnown RBP15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 C19orf60Q96EN9 201 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 SIKE1Q9BRV8 207 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 NUF2Q9BZD4 464 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 NT5DC2Q9H857 520 aa15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 ZNF490Q9ULM2 529 aaPredicted RBP15.19■□□□□ 0.02
TSPAN4-213ENST00000524895 IGHV5-51A0A0C4DH38 117 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 D6RAR5 112 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 GFRA3O60609 400 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 ZBTB11O95625 1053 aaPredicted RBP15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 PDYNP01213 254 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 JUNP05412 331 aaKnown RBP15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 HOXB3P14651 431 aaPredicted RBP15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 SERPINB1P30740 379 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 BCL6P41182 706 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 MLLT3P42568 568 aaPredicted RBP15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 SCTRP47872 440 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 NEK2P51955 445 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 AQP5P55064 265 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 BTKQ06187 659 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 SF3A3Q12874 501 aaKnown RBP eCLIP15.18■□□□□ 0.024e-13■□□□□ 10.4
TSPAN4-213ENST00000524895 ILKQ13418 452 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 ABRAXAS2Q15018 415 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 ZIC1Q15915 447 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 SCIMPQ6UWF3 145 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.18■□□□□ 0.021e-6■■■■■ 92.8
TSPAN4-213ENST00000524895 TTLQ8NG68 377 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 WDR20Q8TBZ3 569 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 USP7Q93009 1102 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 TCTN2Q96GX1 697 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 PPP1R36Q96LQ0 422 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 HBEGFQ99075 208 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 CCT7Q99832 543 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 ZFYVE21Q9BQ24 234 aa15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 FARSBQ9NSD9 589 aaKnown RBP15.18■□□□□ 0.02
TSPAN4-213ENST00000524895 DCTN4Q9UJW0 460 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms