RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 FASTKD3Q14CZ7 662 aaKnown RBP11.76□□□□□ -0.53
VEGFA-223ENST00000523125 RBBP7Q16576 425 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 HIF1AQ16665 826 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 TUBB8Q3ZCM7 444 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 HECTD2Q5U5R9 776 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 IGFL2Q6UWQ7 119 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 VN1R4Q7Z5H5 301 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 ADCK2Q7Z695 626 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 PARP9Q8IXQ6 854 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 SHISA5Q8N114 240 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 EFCAB3Q8N7B9 438 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 RERGQ96A58 199 aaPredicted RBP11.76□□□□□ -0.53
VEGFA-223ENST00000523125 C8orf44Q96CB5 159 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 C19orf60Q96EN9 201 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 SNF8Q96H20 258 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 RUNDC3BQ96NL0 473 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 OLFM1Q99784 485 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 TGIF2Q9GZN2 237 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 DRC3Q9H069 523 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 ATG10Q9H0Y0 220 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 SLAMF7Q9NQ25 335 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 PPANQ9NQ55 473 aaKnown RBP11.76□□□□□ -0.53
VEGFA-223ENST00000523125 TRPC4Q9UBN4 977 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 C3orf18Q9UK00 162 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 VWA7Q9Y334 891 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 CSAG2Q9Y5P2 127 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 PSAT1Q9Y617 370 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 A0A1W2PQ72 361 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 IDSB3KWA1 339 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 E7ESA3 106 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 TXNDC9O14530 226 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 LCMT2O60294 686 aaKnown RBP11.75□□□□□ -0.53
VEGFA-223ENST00000523125 KLHL41O60662 606 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 VPS4BO75351 444 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 STATHP02808 62 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 NPPBP16860 134 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 HRH2P25021 359 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 RPL21P46778 160 aaKnown RBP11.75□□□□□ -0.53
VEGFA-223ENST00000523125 ARL4CP56559 192 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 IL2P60568 153 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 NAE1Q13564 534 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 SYT16Q17RD7 645 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 TMEM207Q6UWW9 146 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 Q6ZS92 163 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 CUZD1Q86UP6 607 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 ANKMY2Q8IV38 441 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 MYO1HQ8N1T3 1032 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 FAM26EQ8N5C1 309 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 GPATCH11Q8N954 259 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 SNRNP40Q96DI7 357 aaKnown RBP11.75□□□□□ -0.53
VEGFA-223ENST00000523125 TM4SF19Q96DZ7 209 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 MMABQ96EY8 250 aaPredicted RBP11.75□□□□□ -0.53
VEGFA-223ENST00000523125 PDLIM5Q96HC4 596 aaKnown RBP11.75□□□□□ -0.53
VEGFA-223ENST00000523125 MACROD1Q9BQ69 325 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 TRIM31Q9BZY9 425 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 PCBD2Q9H0N5 130 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 MKKSQ9NPJ1 570 aaPredicted RBP11.75□□□□□ -0.53
VEGFA-223ENST00000523125 MOCS1Q9NZB8 636 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 IKZF3Q9UKT9 509 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 CORO1CQ9ULV4 474 aaPredicted RBP11.75□□□□□ -0.53
VEGFA-223ENST00000523125 VPS4AQ9UN37 437 aa11.75□□□□□ -0.53
VEGFA-223ENST00000523125 EFCAB8A8MWE9 144 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 TCP11X1B4DZS4 312 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 HPP00738 406 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 COX6A1P12074 109 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 ACPPP15309 386 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 BCL6P41182 706 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 EMP2P54851 167 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 RPS15AP62244 130 aaKnown RBP11.74□□□□□ -0.53
VEGFA-223ENST00000523125 MRPS25P82663 173 aaKnown RBP11.74□□□□□ -0.53
VEGFA-223ENST00000523125 MAT1AQ00266 395 aaKnown RBP11.74□□□□□ -0.53
VEGFA-223ENST00000523125 PDIA2Q13087 525 aaKnown RBP11.74□□□□□ -0.53
VEGFA-223ENST00000523125 PDAP1Q13442 181 aaKnown RBP11.74□□□□□ -0.53
VEGFA-223ENST00000523125 AGAP7PQ5VUJ5 663 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 FAM45BPQ6NSW5 357 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 LCTLQ6UWM7 567 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 SBSNQ6UWP8 590 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 PRSS41Q7RTY9 318 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 C17orf64Q86WR6 236 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 ZC3H7AQ8IWR0 971 aaKnown RBP11.74□□□□□ -0.53
VEGFA-223ENST00000523125 PALM2Q8IXS6 379 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 ZADH2Q8N4Q0 377 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 AMER2Q8N7J2 671 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 FBXO36Q8NEA4 188 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 OR4K1Q8NGD4 311 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 OR9A4Q8NGU2 314 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 OR56A3Q8NH54 315 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 FAM45AQ8TCE6 357 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 THOC3Q96J01 351 aaKnown RBP11.74□□□□□ -0.53
VEGFA-223ENST00000523125 AGAP4Q96P64 663 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 PSMG3-AS1Q96PY0 264 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 OR4K3Q96R72 315 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 KRT12Q99456 494 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 BARD1Q99728 777 aaKnown RBP11.74□□□□□ -0.53
VEGFA-223ENST00000523125 MCMBPQ9BTE3 642 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 LHPPQ9H008 270 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 ZNF160Q9HCG1 818 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 ASF1BQ9NVP2 202 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 RNF14Q9UBS8 474 aa11.74□□□□□ -0.53
VEGFA-223ENST00000523125 NTNG1Q9Y2I2 539 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms