RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 FOXO6A8MYZ6 492 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 SNX4O95219 450 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 AHSA1O95433 338 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 DBIP07108 87 aaKnown RBP15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 TACSTD2P09758 323 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 RBBP4Q09028 425 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 IL18R1Q13478 541 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 IL18Q14116 193 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 CPNE8Q86YQ8 564 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 LRTOMTQ8WZ04 291 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 HSD3B7Q9H2F3 369 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 TCF7L1Q9HCS4 588 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 FAM120CQ9NX05 1096 aaKnown RBP15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 MARK1Q9P0L2 795 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 GPR34Q9UPC5 381 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 FAM25EA8MYX2 175 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 CLUP10909 449 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 DMPKQ09013 629 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 USP30Q70CQ3 517 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 OR4F6Q8NGB9 312 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 OR5K1Q8NHB7 308 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 PLEKHO2Q8TD55 490 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 ZNF717Q9BY31 904 aaPredicted RBP15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 XYLT2Q9H1B5 865 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 MVB12BQ9H7P6 319 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 POPDC3Q9HBV1 291 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 KCTD3Q9Y597 815 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 PCDHGB1Q9Y5G3 927 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 AGPSO00116 658 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 TP53I11O14683 189 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 RCBTB2O95199 551 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 APBB3O95704 486 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 GP1BBP13224 206 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 AP3S2P59780 193 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 ELOAQ14241 798 aaKnown RBP15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 RTP2Q5QGT7 225 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 GOLGA7Q7Z5G4 137 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 SYVN1Q86TM6 617 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 HHATLQ9HCP6 504 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 PRODH2Q9UF12 536 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 CA14Q9ULX7 337 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 DAPL1A0PJW8 107 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 PFKLP17858 780 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 SOX4Q06945 474 aaPredicted RBP15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 OR4F3Q6IEY1 312 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 ZDHHC24Q6UX98 284 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 P2RY8Q86VZ1 359 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 OR2L5Q8NG80 312 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 DIRAS2Q96HU8 199 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 SLC2A13Q96QE2 648 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 OR8D2Q9GZM6 311 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 ZNF358Q9NW07 568 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 PDE10AQ9Y233 779 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 RPL36Q9Y3U8 105 aaKnown RBP15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 SPEF2Q9C093 1822 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 LRRC37A3O60309 1634 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 TCRBV7S3A2A0A539 114 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 STC2O76061 302 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 LINGO3P0C6S8 592 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 ENGP17813 658 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 ZNF41P51814 821 aaPredicted RBP15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 HNRNPKP61978 463 aaKnown RBP eCLIP15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 DUOXA1Q1HG43 343 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 TMCO2Q7Z6W1 182 aaPredicted RBP15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 OR10T2Q8NGX3 314 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 TP53INP1Q96A56 240 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 AKTIPQ9H8T0 292 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 PADI2Q9Y2J8 665 aa15.78■□□□□ 0.12
PCDHA3-201ENST00000522353 AQP12BA6NM10 295 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 ZNF3P17036 446 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 JUNDP17535 347 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 PIM3Q86V86 326 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 AQP12AQ8IXF9 295 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 PHOSPHO1Q8TCT1 267 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 GRHL3Q8TE85 626 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 ASPNQ9BXN1 380 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 NKIRAS2Q9NYR9 191 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 APOBEC3BQ9UH17 382 aaKnown RBP15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 PDCD5O14737 125 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 TNFRSF10BO14763 440 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 RFPL2O75678 378 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 CA3P07451 260 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 C5AR1P21730 350 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 ARCN1P48444 511 aaKnown RBP15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 CDKN1CP49918 316 aaPredicted RBP15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 CD47Q08722 323 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 TRIM74Q86UV6 250 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 CGREF1Q99674 301 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 CADM1Q9BY67 442 aaKnown RBP15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 OR51B5Q9H339 312 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 POMPQ9Y244 141 aa15.77■□□□□ 0.12
PCDHA3-201ENST00000522353 MYADML2A6NDP7 307 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 NPIPA5E9PKD4 350 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 ZNF20P17024 532 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 ETV3P41162 512 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 RBM20Q5T481 1227 aaKnown RBP15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 QSOX2Q6ZRP7 698 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 NANOGNBQ7Z5D8 188 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 ZBTB46Q86UZ6 589 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 MMABQ96EY8 250 aaPredicted RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms