RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 CAB39LQ9H9S4 337 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 CPNE5Q9HCH3 593 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 TXLNGQ9NUQ3 528 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 TLK1Q9UKI8 766 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 TCFL5Q9UL49 500 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 DYRK1BQ9Y463 629 aa9.03□□□□□ -0.96
CLK4-209ENST00000521621 STX16-NPEPL1H3BU86 382 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 STX16O14662 325 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 HAT1O14929 419 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 NSA2O95478 260 aaKnown RBP9.02□□□□□ -0.96
CLK4-209ENST00000521621 NUDT17P0C025 328 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 SMIM10L1P0DMW3 83 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 GNAZP19086 355 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 F8A1P23610 371 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 NFKB2Q00653 900 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 CDC16Q13042 620 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 OR4D1Q15615 310 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 FRMPD2BQ6IN97 320 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 KLC3Q6P597 504 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 EMBQ6PCB8 327 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 BORAQ6PGQ7 559 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 SLCO4C1Q6ZQN7 724 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 FRA10AC1Q70Z53 315 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 COX15Q7KZN9 410 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 VN1R4Q7Z5H5 301 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 RAB43Q86YS6 212 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 RIBC1Q8N443 379 aaPredicted RBP9.02□□□□□ -0.96
CLK4-209ENST00000521621 CSNK1A1LQ8N752 337 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 TRPV3Q8NET8 790 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 OR2Y1Q8NGV0 311 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 MZB1Q8WU39 189 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 MR1Q95460 341 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 SMIM10Q96HG1 83 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 VPS50Q96JG6 964 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 CHST8Q9H2A9 424 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 DNAJC11Q9NVH1 559 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 POLHQ9Y253 713 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 TNPO3Q9Y5L0 923 aaKnown RBP9.02□□□□□ -0.96
CLK4-209ENST00000521621 IKBKGQ9Y6K9 419 aa9.02□□□□□ -0.96
CLK4-209ENST00000521621 CEP295Q9C0D2 2601 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 NTRK1P04629 796 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 C1GALT1C1LP0DN25 315 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 ALDH18A1P54886 795 aaKnown RBP9.02□□□□□ -0.97
CLK4-209ENST00000521621 SKP1P63208 163 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 CSHL1Q14406 222 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 ZNF460Q14592 562 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 SETDB1Q15047 1291 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 PTCHD3Q3KNS1 767 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 TECRLQ5HYJ1 363 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 CAPN12Q6ZSI9 719 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 VASH2Q86V25 355 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 PPFIBP2Q8ND30 876 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 AIF1LQ9BQI0 150 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 EFCAB11Q9BUY7 163 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 TMEM109Q9BVC6 243 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 SLC6A16Q9GZN6 736 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 ACTL8Q9H568 366 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 SEMA3GQ9NS98 782 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 SLC22A11Q9NSA0 550 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 CUEDC1Q9NWM3 386 aaPredicted RBP9.02□□□□□ -0.97
CLK4-209ENST00000521621 GEMIN8Q9NWZ8 242 aaKnown RBP9.02□□□□□ -0.97
CLK4-209ENST00000521621 ZFP69BQ9UJL9 534 aa9.02□□□□□ -0.97
CLK4-209ENST00000521621 A0A096LPK6 155 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 LOC105369274A0A096LPK9 316 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 LOC102723532A0A0G2JNH3 316 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 IQANK1A0A1B0GTG1 560 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 PHGDHO43175 533 aaKnown RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 STK16O75716 305 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 S100BP04271 92 aaPredicted RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 MTHFD2P13995 350 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 ADPRMQ3LIE5 342 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 C19orf48Q6RUI8 117 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 ASPGQ86U10 573 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 TAX1BP1Q86VP1 789 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 OR4N4Q8N0Y3 316 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 AENQ8WTP8 325 aaKnown RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 UBE2E3Q969T4 207 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 PTCD3Q96EY7 689 aaKnown RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 MED8Q96G25 268 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 NPLQ9BXD5 320 aaPredicted RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 ZNF304Q9HCX3 659 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 MKKSQ9NPJ1 570 aaPredicted RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 RYDENQ9NUL5 291 aaKnown RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 MKS1Q9NXB0 559 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 PSMC3IPQ9P2W1 217 aaPredicted RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 IL17BQ9UHF5 180 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 GPN3Q9UHW5 284 aaPredicted RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 RAB21Q9UL25 225 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 RNF112Q9ULX5 631 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 PCDHGA9Q9Y5G4 932 aaKnown RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 SNRNP200O75643 2136 aaKnown RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 EXOC1LA0A1B0GW35 172 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 CLGNO14967 610 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 H2AFYO75367 372 aaKnown RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 CLEC3AO75596 197 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 RFPL1O75677 317 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 ACSL3O95573 720 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 SERPINA6P08185 405 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 FAM153BP0C7A2 387 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 RHOXF2BP0C7M4 288 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms