RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 BAG1Q99933 345 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 BPIFA3Q9BQP9 254 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 LLPHQ9BRT6 129 aaKnown RBP3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 TRAF4Q9BUZ4 470 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 UPF3BQ9BZI7 483 aaKnown RBP3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 FAM107BQ9H098 131 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 RABEP2Q9H5N1 569 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 PELI2Q9HAT8 420 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 IL1RAPL2Q9NP60 686 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 SERINC1Q9NRX5 453 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 PRMT7Q9NVM4 692 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 ARGLU1Q9NWB6 273 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 MDFICQ9P1T7 246 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 SLC24A2Q9UI40 661 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 TUBE1Q9UJT0 475 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 GGA2Q9UJY4 613 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 SMC3Q9UQE7 1217 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 C2CD2Q9Y426 696 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 MYH7P12883 1935 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 MYH13Q9UKX3 1938 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 PIK3C2AO00443 1686 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 MYH10P35580 1976 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 SLIT3O75094 1523 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 FEZF1A0PJY2 475 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 ANKRD65E5RJM6 399 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 UBE2CO00762 179 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 MEIS2O14770 477 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 SLC22A2O15244 555 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 PSMD10O75832 226 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 ERLIN2O94905 339 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 C22orf31O95567 290 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 DNTTP04053 509 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 EDN1P05305 212 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 EIF2S2P20042 333 aaKnown RBP3□□□□□ -1.93
HMGB1P41-201ENST00000520234 CA6P23280 308 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 EEF1B2P24534 225 aaKnown RBP3□□□□□ -1.93
HMGB1P41-201ENST00000520234 GJB2P29033 226 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 PRPHP41219 470 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 SSR1P43307 286 aaKnown RBP3□□□□□ -1.93
HMGB1P41-201ENST00000520234 MAGEA8P43361 318 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 GLIPR1P48060 266 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 CD151P48509 253 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 ASCL1P50553 236 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 RAB28P51157 221 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 LIMK1P53667 647 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 CDH11P55287 796 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 RALGDSQ12967 914 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 KIAA1644Q3SXP7 199 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 ZNF628Q5EBL2 1059 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 ELFN2Q5R3F8 820 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 C6orf163Q5TEZ5 329 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 GFI1BQ5VTD9 330 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 CST9LP1Q5W188 147 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 PRR27Q6MZM9 219 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 RBPMS2Q6ZRY4 209 aaKnown RBP3□□□□□ -1.93
HMGB1P41-201ENST00000520234 DET1Q7L5Y6 550 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 PLPPR4Q7Z2D5 763 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 ZNF329Q86UD4 541 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 IQCHQ86VS3 1027 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 CFAP206Q8IYR0 622 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 ARHGAP24Q8N264 748 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 DNAJC22Q8N4W6 341 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 CNNM3Q8NE01 707 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 TRIM58Q8NG06 486 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 OR13J1Q8NGT2 312 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 FGFBP3Q8TAT2 258 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 FAM76AQ8TAV0 307 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 GRHL3Q8TE85 626 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 SSMEM1Q8WWF3 244 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 IRGQQ8WZA9 623 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 NR4A3Q92570 626 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 ERP27Q96DN0 273 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 ZNF274Q96GC6 653 aaPredicted RBP3□□□□□ -1.93
HMGB1P41-201ENST00000520234 CABS1Q96KC9 395 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 F2RL3Q96RI0 385 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 SH3GL3Q99963 347 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 CARD6Q9BX69 1037 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 PITPNM3Q9BZ71 974 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 TRIM6Q9C030 488 aaPredicted RBP3□□□□□ -1.93
HMGB1P41-201ENST00000520234 MIS12Q9H081 205 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 KCNMB3Q9NPA1 279 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 HOMER3Q9NSC5 361 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 C2orf42Q9NWW7 574 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 LRWD1Q9UFC0 647 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 MTUS1Q9ULD2 1270 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 ABT1Q9ULW3 272 aaKnown RBP3□□□□□ -1.93
HMGB1P41-201ENST00000520234 PADI2Q9Y2J8 665 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 TRIM17Q9Y577 477 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 ADAMTS7Q9UKP4 1686 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 KIF13AQ9H1H9 1805 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 MED23Q9ULK4 1368 aa3□□□□□ -1.93
HMGB1P41-201ENST00000520234 FMN2Q9NZ56 1722 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 MARF1Q9Y4F3 1742 aaKnown RBP2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 SH3TC1Q8TE82 1336 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 MRC1P22897 1456 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 IGLV9-49A0A0B4J1Y8 123 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 LOC101059948A0A1B0GTJ6 334 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 A0A1W2PPQ1 181 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 NEMP2A6NFY4 417 aa2.99□□□□□ -1.93
HMGB1P41-201ENST00000520234 LRRIQ3A6PVS8 624 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms