RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 DEC1Q9P2X7 70 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 EPS15L1Q9UBC2 864 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 CACNG4Q9UBN1 327 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 MTRF1LQ9UGC7 380 aaKnown RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 HMGXB4Q9UGU5 601 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 SUN2Q9UH99 717 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 CHORDC1Q9UHD1 332 aaPredicted RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 PCSK1NQ9UHG2 260 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 VPS28Q9UK41 221 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 TTC7AQ9ULT0 858 aaPredicted RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 SCML1Q9UN30 329 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 SLC12A4Q9UP95 1085 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 NAALADL1Q9UQQ1 740 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 ZNF148Q9UQR1 794 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 AAR2Q9Y312 384 aaKnown RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 UTP11Q9Y3A2 253 aaKnown RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 DTNAQ9Y4J8 743 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 CPQQ9Y646 472 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 ALG6Q9Y672 507 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 NLRC5Q86WI3 1866 aa1.84□□□□□ -2.12
CCNC-208ENST00000519617 ALPK3Q96L96 1907 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 MTCL1Q9Y4B5 1905 aaKnown RBP1.83□□□□□ -2.12
CCNC-208ENST00000519617 TRIOBPQ9H2D6 2365 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 hCG_2014768A0A024R1R8 64 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 A0A0U1RQJ8 604 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 A0A1B0GU03 582 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 A0A1W2PPC4 97 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 ILVBLA1L0T0 632 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 MAGEB16A2A368 324 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 TARSL2A2RTX5 802 aaKnown RBP1.83□□□□□ -2.12
CCNC-208ENST00000519617 TBC1D3BA6NDS4 549 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 RHPN2P1A8MT19 583 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 HEPACAM2A8MVW5 462 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 HHLA1C9JL84 531 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 E9PAM4 449 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 NEDD8-MDP1E9PL57 170 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 H7C0C1 242 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 SGK1O00141 431 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 HSPB6O14558 160 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 ALOX15BO15296 676 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 ADAM12O43184 909 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 HOXC11O43248 304 aaPredicted RBP1.83□□□□□ -2.12
CCNC-208ENST00000519617 MBTPS2O43462 519 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 BUB1O43683 1085 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 XPNPEP2O43895 674 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 ZNF500O60304 480 aaPredicted RBP1.83□□□□□ -2.12
CCNC-208ENST00000519617 CACNG3O60359 315 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 CST8O60676 142 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 ZG16O60844 167 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 TBL1XO60907 577 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 PEX14O75381 377 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 LRCH4O75427 683 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 RFPL2O75678 378 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 GRAP2O75791 330 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 BEST1O76090 585 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 HEXIM1O94992 359 aaKnown RBP1.83□□□□□ -2.12
CCNC-208ENST00000519617 NDST3O95803 873 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 CER1O95813 267 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 TBX6O95947 436 aaPredicted RBP1.83□□□□□ -2.12
CCNC-208ENST00000519617 IGSF6O95976 241 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 IGLV3-25P01717 112 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 IGLV3-27P01718 113 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 FGGP02679 453 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 PYGLP06737 847 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 HMBSP08397 361 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 SERPINF2P08697 491 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 LINC00271P0C7V0 271 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 PNMA6AP0CW24 399 aaPredicted RBP1.83□□□□□ -2.12
CCNC-208ENST00000519617 IRF1P10914 325 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 ACADMP11310 421 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 LAMP2P13473 410 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 HMGA1P17096 107 aaKnown RBP1.83□□□□□ -2.12
CCNC-208ENST00000519617 DGKAP23743 735 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 KDELR1P24390 212 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 CCNCP24863 283 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 DNAJB1P25685 340 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 SERPINA4P29622 427 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 C21orf33P30042 268 aaPredicted RBP1.83□□□□□ -2.12
CCNC-208ENST00000519617 GDI1P31150 447 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 GRK5P34947 590 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 GJC1P36383 396 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 NUDT1P36639 197 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 FDFT1P37268 417 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 TNFRSF4P43489 277 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 ATP5OP48047 213 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 SUOXP51687 545 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 PLK1P53350 603 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 GEMP55040 296 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 CDH12P55289 794 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 RPL26P61254 145 aaKnown RBP1.83□□□□□ -2.12
CCNC-208ENST00000519617 AP1S1P61966 158 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 SNRPD1P62314 119 aaKnown RBP1.83□□□□□ -2.12
CCNC-208ENST00000519617 RPL7AP62424 266 aaKnown RBP1.83□□□□□ -2.12
CCNC-208ENST00000519617 CDK16Q00536 496 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 ECT2LQ008S8 904 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 GNA12Q03113 381 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 FCHO2Q0JRZ9 810 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 AP1B1Q10567 949 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 MYBPHQ13203 477 aa1.83□□□□□ -2.12
CCNC-208ENST00000519617 RUNX3Q13761 415 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms