RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 NCF1CA8MVU1 366 aaPredicted RBP12.67□□□□□ -0.38
VEGFA-219ENST00000518824 B8ZZF3 427 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 TAPBPO15533 448 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 NCF1P14598 390 aaPredicted RBP12.67□□□□□ -0.38
VEGFA-219ENST00000518824 CD1DP15813 335 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 FOLR3P41439 243 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 CCL11P51671 97 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 AP1S2P56377 157 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 CSHL1Q14406 222 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 FAM214AQ32MH5 1076 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 VWA2Q5GFL6 755 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 GRTP1Q5TC63 336 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 CAPN13Q6MZZ7 669 aaPredicted RBP12.67□□□□□ -0.38
VEGFA-219ENST00000518824 MRGPREQ86SM8 312 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 LAPTM4BQ86VI4 370 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 APLFQ8IW19 511 aaPredicted RBP12.67□□□□□ -0.38
VEGFA-219ENST00000518824 OR2Y1Q8NGV0 311 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 C9orf43Q8TAL5 461 aaPredicted RBP12.67□□□□□ -0.38
VEGFA-219ENST00000518824 UHMK1Q8TAS1 419 aaKnown RBP12.67□□□□□ -0.38
VEGFA-219ENST00000518824 THAP4Q8WY91 577 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 NEIL2Q969S2 332 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 TRIM44Q96DX7 344 aaPredicted RBP12.67□□□□□ -0.38
VEGFA-219ENST00000518824 DHRS4Q9BTZ2 278 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 DERL2Q9GZP9 239 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 ING2Q9H160 280 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 POPDC3Q9HBV1 291 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 CTNNAL1Q9UBT7 734 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 NOVA2Q9UNW9 492 aaKnown RBP12.67□□□□□ -0.38
VEGFA-219ENST00000518824 SLC22A14Q9Y267 594 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 OARD1Q9Y530 152 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 NUP210LQ5VU65 1888 aa12.67□□□□□ -0.38
VEGFA-219ENST00000518824 ZNF462Q96JM2 2506 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 A0A0A6YYC8 382 aaPredicted RBP12.66□□□□□ -0.38
VEGFA-219ENST00000518824 VSTM2BA6NLU5 285 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 I3L1I5 382 aaPredicted RBP12.66□□□□□ -0.38
VEGFA-219ENST00000518824 KIF2AO00139 706 aaPredicted RBP12.66□□□□□ -0.38
VEGFA-219ENST00000518824 RFPL1O75677 317 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 ACSL3O95573 720 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 B3GALT4O96024 378 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 ENO2P09104 434 aaPredicted RBP12.66□□□□□ -0.38
VEGFA-219ENST00000518824 SLC35E2BP0CK96 405 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 PLA2G2AP14555 144 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 STMN1P16949 149 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 STX2P32856 288 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 SPRP35270 261 aaPredicted RBP12.66□□□□□ -0.38
VEGFA-219ENST00000518824 SLC12A2P55011 1212 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 RAB10P61026 200 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 MAT1AQ00266 395 aaKnown RBP12.66□□□□□ -0.38
VEGFA-219ENST00000518824 IRF9Q00978 393 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 RELAQ04206 551 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 SSPNQ14714 243 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 SLMAPQ14BN4 828 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 NAA25Q14CX7 972 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 MUM1Q2TAK8 710 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 YOD1Q5VVQ6 348 aaPredicted RBP12.66□□□□□ -0.38
VEGFA-219ENST00000518824 THOC6Q86W42 341 aaKnown RBP12.66□□□□□ -0.38
VEGFA-219ENST00000518824 AMER3Q8N944 861 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 KCT2Q8NC54 265 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 MNS1Q8NEH6 495 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 OR4K1Q8NGD4 311 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 COL26A1Q96A83 441 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 RHBDF1Q96CC6 855 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 TM4SF19Q96DZ7 209 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 UBXN10Q96LJ8 280 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 EGFL8Q99944 293 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 TMEM79Q9BSE2 394 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 TRIM54Q9BYV2 358 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 TRIM4Q9C037 500 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 PCBD2Q9H0N5 130 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 ZNF304Q9HCX3 659 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 TXNDC16Q9P2K2 825 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 TUBD1Q9UJT1 453 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 PADI2Q9Y2J8 665 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 ASB1Q9Y576 335 aa12.66□□□□□ -0.38
VEGFA-219ENST00000518824 FASNP49327 2511 aaKnown RBP12.65□□□□□ -0.38
VEGFA-219ENST00000518824 A6NL46 340 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 PRAMEF4O60810 478 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 DNAJB6O75190 326 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 TUBB4AP04350 444 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 RHOXF2BP0C7M4 288 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 VARSP26640 1264 aaKnown RBP12.65□□□□□ -0.38
VEGFA-219ENST00000518824 CSRP3P50461 194 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 RAPSNQ13702 412 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 TGFBIQ15582 683 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 UAP1Q16222 522 aaPredicted RBP12.65□□□□□ -0.38
VEGFA-219ENST00000518824 MROH9Q5TGP6 573 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 PRAMEF9Q5VWM5 478 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 ZNF605Q86T29 641 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 MFSD9Q8NBP5 474 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 FDCSPQ8NFU4 85 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 ABHD11Q8NFV4 315 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 OR9A4Q8NGU2 314 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 ZCCHC10Q8TBK6 192 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 STT3BQ8TCJ2 826 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 ANKRD7Q92527 254 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 EXT2Q93063 718 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 RERGQ96A58 199 aaPredicted RBP12.65□□□□□ -0.38
VEGFA-219ENST00000518824 FKBP10Q96AY3 582 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 NXNL1Q96CM4 212 aa12.65□□□□□ -0.38
VEGFA-219ENST00000518824 TSPAN17Q96FV3 270 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms