RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 OLFM1Q99784 485 aa11.04□□□□□ -0.64
TMEM55A-202ENST00000518359 PLCD4Q9BRC7 762 aa11.04□□□□□ -0.64
TMEM55A-202ENST00000518359 ACAT2Q9BWD1 397 aa11.04□□□□□ -0.64
TMEM55A-202ENST00000518359 VN1R1Q9GZP7 353 aa11.04□□□□□ -0.64
TMEM55A-202ENST00000518359 TP63Q9H3D4 680 aaPredicted RBP11.04□□□□□ -0.64
TMEM55A-202ENST00000518359 MRPS30Q9NP92 439 aaKnown RBP11.04□□□□□ -0.64
TMEM55A-202ENST00000518359 MMP25Q9NPA2 562 aa11.04□□□□□ -0.64
TMEM55A-202ENST00000518359 SPTLC3Q9NUV7 552 aa11.04□□□□□ -0.64
TMEM55A-202ENST00000518359 LRFN1Q9P244 771 aa11.04□□□□□ -0.64
TMEM55A-202ENST00000518359 GNPTGQ9UJJ9 305 aa11.04□□□□□ -0.64
TMEM55A-202ENST00000518359 INTUQ9ULD6 942 aa11.04□□□□□ -0.64
TMEM55A-202ENST00000518359 EFR3BQ9Y2G0 817 aa11.04□□□□□ -0.64
TMEM55A-202ENST00000518359 A0A1W2PPV9 198 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 USP27XA6NNY8 438 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 H0YIG0 161 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 TFECO14948 347 aaPredicted RBP11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 PSMD3O43242 534 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 ZNHIT1O43257 154 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 FOXS1O43638 330 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 NME2P1O60361 137 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 SLC25A12O75746 678 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 NEURL1O76050 574 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 CCNDBP1O95273 360 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 C1orf105O95561 183 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 HOXD4P09016 255 aaPredicted RBP11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 EZRP15311 586 aaKnown RBP11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 NME2P22392 152 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 RPA3P35244 121 aaPredicted RBP11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 MARCKSL1P49006 195 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 MAT1AQ00266 395 aaKnown RBP11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 TFF3Q07654 80 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 PTK6Q13882 451 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 TRIM14Q14142 442 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 P3H1Q32P28 736 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 PTRHD1Q6GMV3 140 aaKnown RBP11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 LANCL3Q6ZV70 420 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 CHERPQ8IWX8 916 aaKnown RBP11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 POGLUT1Q8NBL1 392 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 OR4L1Q8NH43 312 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 LKAAEAR1Q8TD35 194 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 NRGNQ92686 78 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 HDAC10Q969S8 669 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 CCM2LQ9NUG4 571 aaPredicted RBP11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 PIH1D1Q9NWS0 290 aaKnown RBP11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 DNAJB12Q9NXW2 375 aaKnown RBP11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 ANAPC5Q9UJX4 755 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 RNF6Q9Y252 685 aa11.03□□□□□ -0.64
TMEM55A-202ENST00000518359 SOWAHDA6NJG2 315 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 IQCF5A8MTL0 148 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 PRMT5O14744 637 aaPredicted RBP11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 PJA2O43164 708 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 PRMT3O60678 531 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 TOXO94900 526 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 GOT2P00505 430 aaKnown RBP11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 TPM1P09493 284 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 PTGER1P34995 402 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 EFNA3P52797 238 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 HADHBP55084 474 aaKnown RBP11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 PRAMEP78395 509 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 FOXD4Q12950 439 aaPredicted RBP11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 CCSMST1Q4G0I0 132 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 CCDC38Q502W7 563 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 TAOK1Q7L7X3 1001 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 OTOAQ7RTW8 1153 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 FGD2Q7Z6J4 655 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 ANKRD37Q7Z713 158 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 PAQR7Q86WK9 346 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 KRT222Q8N1A0 295 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 CPSF7Q8N684 471 aaKnown RBP11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 AMER2Q8N7J2 671 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 MYRIPQ8NFW9 859 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 OR13J1Q8NGT2 312 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 OR6P1Q8NGX9 317 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 SMPDL3AQ92484 453 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 TMEM125Q96AQ2 219 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 OR2A5Q96R48 311 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 LPAR4Q99677 370 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 NPAS2Q99743 824 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 GOLPH3Q9H4A6 298 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 GSX1Q9H4S2 264 aaPredicted RBP11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 NHEJ1Q9H9Q4 299 aaPredicted RBP11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 ST6GALNAC2Q9UJ37 374 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 NFS1Q9Y697 457 aa11.02□□□□□ -0.65
TMEM55A-202ENST00000518359 SCN3AQ9NY46 2000 aa11.01□□□□□ -0.65
TMEM55A-202ENST00000518359 AKAP6Q13023 2319 aa11.01□□□□□ -0.65
TMEM55A-202ENST00000518359 NSD1Q96L73 2696 aaPredicted RBP11.01□□□□□ -0.65
TMEM55A-202ENST00000518359 A0A0U1RQJ8 604 aa11.01□□□□□ -0.65
TMEM55A-202ENST00000518359 A0A1B0GTH9 108 aa11.01□□□□□ -0.65
TMEM55A-202ENST00000518359 FAM237BA0A1B0GVD1 139 aa11.01□□□□□ -0.65
TMEM55A-202ENST00000518359 GOLGA6L19H0YKK7 550 aa11.01□□□□□ -0.65
TMEM55A-202ENST00000518359 NDC80O14777 642 aa11.01□□□□□ -0.65
TMEM55A-202ENST00000518359 NSA2O95478 260 aaKnown RBP11.01□□□□□ -0.65
TMEM55A-202ENST00000518359 DNASE1P24855 282 aa11.01□□□□□ -0.65
TMEM55A-202ENST00000518359 CETN2P41208 172 aa11.01□□□□□ -0.65
TMEM55A-202ENST00000518359 XCR1P46094 333 aa11.01□□□□□ -0.65
TMEM55A-202ENST00000518359 CYB561P49447 251 aa11.01□□□□□ -0.65
TMEM55A-202ENST00000518359 TTPAP49638 278 aa11.01□□□□□ -0.65
TMEM55A-202ENST00000518359 ST13P50502 369 aaKnown RBP11.01□□□□□ -0.65
TMEM55A-202ENST00000518359 YBX1P67809 324 aaKnown RBP11.01□□□□□ -0.65
TMEM55A-202ENST00000518359 RELAQ04206 551 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms