RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 PARP8Q8N3A8 854 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TCEANCQ8N8B7 351 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 PRPF31Q8WWY3 499 aaKnown RBP2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 PIK3R3Q92569 461 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 RSRC1Q96IZ7 334 aaKnown RBP2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 BTBD9Q96Q07 612 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TNFRSF19Q9NS68 423 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 HACD3Q9P035 362 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 RPS6KL1Q9Y6S9 549 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 A0A1W2PPQ1 181 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 SHISA7A6NL88 538 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 AGAP14A8MT82 685 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 G3V2L1 256 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 MTRF1O75570 445 aaKnown RBP2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 RPS6KA5O75582 802 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TOMM70O94826 608 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 NXPH4O95158 308 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 MYOGP15173 224 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 PKLRP30613 574 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ASCL1P50553 236 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ATP4BP51164 291 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 RIDAP52758 137 aaKnown RBP2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 NDST2P52849 883 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 DLK1P80370 383 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 BAATQ14032 418 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 KIAA0141Q14154 515 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 AGAP7PQ5VUJ5 663 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 RNLSQ5VYX0 342 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TMUB2Q71RG4 321 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 RCOR2Q8IZ40 523 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CFAP61Q8NHU2 1237 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 AGAP11Q8TF27 550 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 KCNE4Q8WWG9 221 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TSACCQ96A04 125 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 B3GALT6Q96L58 329 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ZIM3Q96PE6 472 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TREX2Q9BQ50 279 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 SDF4Q9BRK5 362 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CHCHD6Q9BRQ6 235 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 GOLPH3LQ9H4A5 285 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CDH20Q9HBT6 801 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 PIH1D3Q9NQM4 214 aaKnown RBP2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 GSN-AS1Q9NRJ2 163 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 GDE1Q9NZC3 331 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 MRPL15Q9P015 296 aaKnown RBP2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TXNDC16Q9P2K2 825 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ABCD2Q9UBJ2 740 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ZNF256Q9Y2P7 627 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 COL16A1Q07092 1604 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 NPHP3Q7Z494 1330 aa2.16□□□□□ -2.06
RNU6-1088P-201ENST00000516850 FSD2A1L4K1 749 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 A8MV72 311 aaPredicted RBP2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 CYTIPO60759 359 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ZNF354AO60765 605 aaPredicted RBP2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ALOX12P18054 663 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ZBTB25P24278 435 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 LHX1P48742 406 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 KHKP50053 298 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 NDUFV3P56181 108 aaKnown RBP2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 SRSF9Q13242 221 aaKnown RBP eCLIP2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 TRA2AQ13595 282 aaKnown RBP eCLIP2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ATP1A1-AS1Q5TC04 95 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 KRTAP11-1Q8IUC1 163 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 CD177Q8N6Q3 437 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 C4orf32Q8N8J7 132 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 RTL3Q8N8U3 475 aaKnown RBP2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 GBP7Q8N8V2 638 aaPredicted RBP2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 RASGEF1AQ8N9B8 481 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 CSNK1G2-AS1Q8NCQ2 148 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 RPLP0P6Q8NHW5 317 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 PROX1Q92786 737 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 SLC22A18Q96BI1 424 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 TMCO6Q96DC7 493 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 LINC00167Q96N53 147 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 HNRNPABQ99729 332 aaKnown RBP2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 MGME1Q9BQP7 344 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 EGLN3Q9H6Z9 239 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 Q9H8V8 135 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 TBC1D13Q9NVG8 400 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ZNF69Q9UC07 566 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ADD3Q9UEY8 706 aaKnown RBP2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 VPS28Q9UK41 221 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 RNF150Q9ULK6 438 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 TMEM5Q9Y2B1 443 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 AUP1Q9Y679 476 aa2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 RSF1Q96T23 1441 aaPredicted RBP2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ARID4BQ4LE39 1312 aaPredicted RBP2.15□□□□□ -2.07
RNU6-1088P-201ENST00000516850 IGHV3-38A0A0C4DH36 116 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 hCG_1807616A0A1W2PRN6 198 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 CASTOR2A6NHX0 329 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 C2CD4DB7Z1M9 353 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 E9PAM4 449 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 THY1P04216 161 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 RPLP0P05388 317 aaKnown RBP2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ADORA3P0DMS8 318 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 MYL6BP14649 208 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 EEF1B2P24534 225 aaKnown RBP2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 PCGF2P35227 344 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms