RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 GPR78Q96P69 363 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 NPAS1Q99742 590 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 FTHL17Q9BXU8 183 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 NMRAL1Q9HBL8 299 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 GLOD4Q9HC38 313 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 AKIP1Q9NQ31 210 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 TREX1Q9NSU2 369 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 TRMT13Q9NUP7 481 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 CTSFQ9UBX1 484 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 SLC2A6Q9UGQ3 507 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 MLXQ9UH92 298 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 DGKBQ9Y6T7 804 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 E9PAM4 449 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 TCAPO15273 167 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 FGF10O15520 208 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 B4GAT1O43505 415 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 CHRNGP07510 517 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 CKMT1AP12532 417 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 TYMPP19971 482 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 ITGB8P26012 769 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 CCND3P30281 292 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 DDOSTP39656 456 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 OR2B6P58173 313 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 MPP1Q00013 466 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 BNC1Q01954 994 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 MEF2AQ02078 507 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 NRG1Q02297 640 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 NFYCQ13952 458 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 CCNIQ14094 377 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 RAB39AQ14964 217 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 MZT2AQ6P582 158 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 FBXO46Q6PJ61 603 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 ZNF280BQ86YH2 543 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 CEP97Q8IW35 865 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 NRSN1Q8IZ57 195 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 LIX1Q8N485 282 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 FAM26EQ8N5C1 309 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 CLRN3Q8NCR9 226 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 PSMA8Q8TAA3 256 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 SNX33Q8WV41 574 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 SLC13A3Q8WWT9 602 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 RNF34Q969K3 372 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 DACH2Q96NX9 599 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 GATA5Q9BWX5 397 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 OR51M1Q9H341 326 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 RHOJQ9H4E5 214 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 CCM2LQ9NUG4 571 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 NPAP1Q9NZP6 1156 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 WARS2Q9UGM6 360 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 AAR2Q9Y312 384 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 RNF11Q9Y3C5 154 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 A0A1W2PQH9 124 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 WWP2O00308 870 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 PHGDHO43175 533 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 AKAP8O43823 692 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 LILRB5O75023 590 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 XYLBO75191 536 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 SMIM6P0DI80 62 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 SPNP16150 400 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 CD36P16671 472 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 CCR1P32246 355 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 CHRNA4P43681 627 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 GPR15P49685 360 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 YBEYP58557 167 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 ABATP80404 500 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 ZNF460Q14592 562 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 RFX4Q33E94 735 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 AKIRIN2Q53H80 203 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 PCID2Q5JVF3 399 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 TSTD2Q5T7W7 516 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 BROXQ5VW32 411 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 ETFRF1Q6IPR1 90 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 ESRP1Q6NXG1 681 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 NUDT18Q6ZVK8 323 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 NLRP8Q86W28 1048 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 RTL3Q8N8U3 475 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 OR2T34Q8NGX1 318 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 CLHC1Q8NHS4 586 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 SETD7Q8WTS6 366 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 DEDD2Q8WXF8 326 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 RELTQ969Z4 430 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 TIFAQ96CG3 184 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 NUDT16L1Q9BRJ7 211 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 FICDQ9BVA6 458 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 PARD6GQ9BYG4 376 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 SLC22A4Q9H015 551 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 POLR1BQ9H9Y6 1135 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 NMRK2Q9NPI5 230 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 MPP6Q9NZW5 540 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 SLC39A10Q9ULF5 831 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 TCAF1Q9Y4C2 921 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 TANC1Q9C0D5 1861 aa7.25□□□□□ -1.25
PDLIM5-219ENST00000514743 LINC00862A6NCI5 91 aa7.25□□□□□ -1.25
PDLIM5-219ENST00000514743 WASH4PA8MWX3 477 aa7.25□□□□□ -1.25
PDLIM5-219ENST00000514743 VSTM5A8MXK1 200 aa7.25□□□□□ -1.25
PDLIM5-219ENST00000514743 BTN3A3O00478 584 aa7.25□□□□□ -1.25
PDLIM5-219ENST00000514743 NEMP1O14524 444 aa7.25□□□□□ -1.25
PDLIM5-219ENST00000514743 VEGFDO43915 354 aa7.25□□□□□ -1.25
PDLIM5-219ENST00000514743 PLATP00750 562 aa7.25□□□□□ -1.25
PDLIM5-219ENST00000514743 RAB4AP20338 218 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms