RNA–Protein interactions for RNA: ENST00000514096.5

LIMCH1-219, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-219ENST00000514096 FZD6O60353 706 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 ACSL3O95573 720 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 SOD1P00441 154 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 IGLV3-19P01714 112 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 PRB1P04280 392 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 VCLP18206 1134 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 SDHBP21912 280 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 GNG2P59768 71 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 YBX1P67809 324 aaKnown RBP7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 CXADRP78310 365 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 INSM1Q01101 510 aaPredicted RBP7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 GPR18Q14330 331 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 CYP2A13Q16696 494 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 EMBQ6PCB8 327 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 RANBP10Q6VN20 620 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 OR5AR1Q8NGP9 310 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 OR4L1Q8NH43 312 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 FIG4Q92562 907 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 FCRL4Q96PJ5 515 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 PPP1R2P1Q96PQ5 205 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 ZNF184Q99676 751 aaPredicted RBP7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 C19orf43Q9BQ61 176 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 USB1Q9BQ65 265 aaKnown RBP7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 FRMD8Q9BZ67 464 aaPredicted RBP7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 TP63Q9H3D4 680 aaPredicted RBP7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 DCLRE1BQ9H816 532 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 MAGEE1Q9HCI5 957 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 TBCCD1Q9NVR7 557 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 MAT2BQ9NZL9 334 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 TMPRSS11EQ9UL52 423 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 PLXNA2O75051 1894 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 EFCAB7A8K855 629 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 CAPN5O15484 640 aaPredicted RBP7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 BRINP1O60477 761 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 CCDC22O60826 627 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 EDN3P14138 238 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 MAGP20916 626 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 SSTR1P30872 391 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 GDI2P50395 445 aaKnown RBP7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 VBP1P61758 197 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 ITGA9Q13797 1035 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 EFTUD2Q15029 972 aaKnown RBP eCLIP7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 RGS21Q2M5E4 152 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 TAF1BQ53T94 588 aaPredicted RBP7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 JAZF1Q86VZ6 243 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 C4orf33Q8N1A6 199 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 LRRC20Q8TCA0 184 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 MED8Q96G25 268 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 MACROD1Q9BQ69 325 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 DUSP23Q9BVJ7 150 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 IFT22Q9H7X7 185 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 SLC39A10Q9ULF5 831 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 PMF1-BGLAPU3KQ54 211 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 SCN3AQ9NY46 2000 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 NAV2Q8IVL1 2488 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 POC1B-GALNT4F8VUJ3 575 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 RGS16O15492 202 aaPredicted RBP7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 RAD51CO43502 376 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 B4GAT1O43505 415 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 ELK3P41970 407 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 BDKRB1P46663 353 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 KCNJ5P48544 419 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 YPEL5P62699 121 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 OASLQ15646 514 aaKnown RBP7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 ARMC4Q5T2S8 1044 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 HENMT1Q5T8I9 393 aaKnown RBP7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 MLIPQ5VWP3 458 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 KBTBD2Q8IY47 623 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 CATSPER1Q8NEC5 780 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 CPT1BQ92523 772 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 PYCR2Q96C36 320 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 DEPDC7Q96QD5 511 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 TRIB3Q96RU7 358 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 ATG10Q9H0Y0 220 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 CATSPERZQ9NTU4 200 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 OCIAD1Q9NX40 245 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 PTTG2Q9NZH5 202 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 BCAP29Q9UHQ4 241 aa7.64□□□□□ -1.19
LIMCH1-219ENST00000514096 IGSF10Q6WRI0 2623 aa7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 CD3EAPO15446 510 aaKnown RBP7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 NUAK1O60285 661 aa7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 CLEC2LP0C7M8 214 aa7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 DRD4P21917 467 aa7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 GRK2P25098 689 aa7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 ACADVLP49748 655 aa7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 DUSP3P51452 185 aaPredicted RBP7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 MADCAM1Q13477 382 aa7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 PEX6Q13608 980 aa7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 TAF1AQ15573 450 aaPredicted RBP7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 PTCHD3Q3KNS1 767 aa7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 MSS51Q4VC12 460 aa7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 C14orf28Q4W4Y0 310 aa7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 CACHD1Q5VU97 1274 aa7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 DENND5AQ6IQ26 1287 aa7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 TRMT10BQ6PF06 316 aaKnown RBP7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 TMC3Q7Z5M5 1100 aa7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 CROCCP3Q8IVE0 287 aa7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 ZNF547Q8IVP9 402 aa7.63□□□□□ -1.19
LIMCH1-219ENST00000514096 PDIK1LQ8N165 341 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms