RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 OR8J2Q8NGG1 315 aa14.39□□□□□ -0.11
VCAN-211ENST00000513984 LRTOMTQ8WZ04 291 aa14.39□□□□□ -0.11
VCAN-211ENST00000513984 SMPDL3AQ92484 453 aa14.39□□□□□ -0.11
VCAN-211ENST00000513984 C12orf66Q96MD2 445 aa14.39□□□□□ -0.11
VCAN-211ENST00000513984 INSM2Q96T92 566 aaPredicted RBP14.39□□□□□ -0.11
VCAN-211ENST00000513984 CPPED1Q9BRF8 314 aaPredicted RBP14.39□□□□□ -0.11
VCAN-211ENST00000513984 IKZF5Q9H5V7 419 aa14.39□□□□□ -0.11
VCAN-211ENST00000513984 CD93Q9NPY3 652 aa14.39□□□□□ -0.11
VCAN-211ENST00000513984 WASH6PQ9NQA3 447 aa14.39□□□□□ -0.11
VCAN-211ENST00000513984 SLC6A13Q9NSD5 602 aa14.39□□□□□ -0.11
VCAN-211ENST00000513984 KCNK6Q9Y257 313 aa14.39□□□□□ -0.11
VCAN-211ENST00000513984 PCDHB14Q9Y5E9 798 aa14.39□□□□□ -0.11
VCAN-211ENST00000513984 SCAMP2O15127 329 aaKnown RBP14.38□□□□□ -0.11
VCAN-211ENST00000513984 HNRNPRO43390 633 aaKnown RBP14.38□□□□□ -0.11
VCAN-211ENST00000513984 UMPSP11172 480 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 NCK1P16333 377 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 PHEXP78562 749 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 LRIT3Q3SXY7 679 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 GTDC1Q4AE62 458 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 OR4F3Q6IEY1 312 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 HMBOX1Q6NT76 420 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 ERMP1Q7Z2K6 904 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 CAMKMTQ7Z624 323 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 C17orf64Q86WR6 236 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 KRT78Q8N1N4 520 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 TMEM132CQ8N3T6 1108 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 DTWD1Q8N5C7 304 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 ICA1LQ8NDH6 482 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 OR7A2PQ8NGA2 310 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 NELL1Q92832 810 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 GFM2Q969S9 779 aaKnown RBP14.38□□□□□ -0.11
VCAN-211ENST00000513984 MYOCQ99972 504 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 REXO4Q9GZR2 422 aaKnown RBP14.38□□□□□ -0.11
VCAN-211ENST00000513984 RPF2Q9H7B2 306 aaKnown RBP14.38□□□□□ -0.11
VCAN-211ENST00000513984 FGF22Q9HCT0 170 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 FAM120CQ9NX05 1096 aaKnown RBP14.38□□□□□ -0.11
VCAN-211ENST00000513984 TAC3Q9UHF0 121 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 CNOT11Q9UKZ1 510 aaKnown RBP14.38□□□□□ -0.11
VCAN-211ENST00000513984 EYSQ5T1H1 3165 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 A0A1W2PPV9 198 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 PRSS38A1L453 326 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 POM121BA6NF01 834 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 LATO43561 262 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 AKAP10O43572 662 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 SCN2BO60939 215 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 ANXA4P09525 319 aaPredicted RBP14.38□□□□□ -0.11
VCAN-211ENST00000513984 UQCRBP14927 111 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 GGT1P19440 569 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 IL10P22301 178 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 IDSP22304 550 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 OXTRP30559 389 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 ACSL1P33121 698 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 TRPC1P48995 793 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 TPMTP51580 245 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 WNT3P56703 355 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 MEF2AQ02078 507 aaPredicted RBP14.38□□□□□ -0.11
VCAN-211ENST00000513984 SF1Q15637 639 aaKnown RBP14.38□□□□□ -0.11
VCAN-211ENST00000513984 CYP51A1Q16850 503 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 TBCELQ5QJ74 424 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 GLYATQ6IB77 296 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 TMIGD1Q6UXZ0 262 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 RAB42Q8N4Z0 105 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 C2orf73Q8N5S3 287 aaPredicted RBP14.38□□□□□ -0.11
VCAN-211ENST00000513984 PAPD5Q8NDF8 572 aaKnown RBP14.38□□□□□ -0.11
VCAN-211ENST00000513984 ZNF740Q8NDX6 193 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 ZNF548Q8NEK5 533 aaPredicted RBP14.38□□□□□ -0.11
VCAN-211ENST00000513984 ABHD11Q8NFV4 315 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 TNIP2Q8NFZ5 429 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 OR2T12Q8NG77 320 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 FAM3CQ92520 227 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 FERD3LQ96RJ6 166 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 INPP5KQ9BT40 448 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 THUMPD3Q9BV44 507 aaKnown RBP14.38□□□□□ -0.11
VCAN-211ENST00000513984 PIF1Q9H611 641 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 PLEKHM1Q9Y4G2 1056 aa14.38□□□□□ -0.11
VCAN-211ENST00000513984 TCRBV21S2A2A0A5A6 115 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 RFXANKO14593 260 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 NARSO43776 548 aaKnown RBP14.37□□□□□ -0.11
VCAN-211ENST00000513984 PCDH7O60245 1069 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 SH3BGRLO75368 114 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 TIPRLO75663 272 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 B3GALT4O96024 378 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 ASGR2P07307 311 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 COX7A2P14406 83 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 GABRG2P18507 467 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 KLC1Q07866 573 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 CLCA4Q14CN2 919 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 DUOXA1Q1HG43 343 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 UAP1L1Q3KQV9 507 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 MTX3Q5HYI7 312 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 ARMCX6Q7L4S7 300 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 VN1R5Q7Z5H4 357 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 ANKRD46Q86W74 232 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 CALHM3Q86XJ0 350 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 LINC01555Q8NAE3 123 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 GPR156Q8NFN8 814 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 OR10A6Q8NH74 314 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 FAM110BQ8TC76 370 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 NSMCE2Q96MF7 247 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 CAMK1GQ96NX5 476 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms