RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 SPANXN4Q5MJ08 99 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 ICE2Q659A1 982 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 HIST2H2AA3Q6FI13 130 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 TMIGD1Q6UXZ0 262 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 KIAA2013Q8IYS2 634 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 RAB42Q8N4Z0 105 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 GPBAR1Q8TDU6 330 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 SH3KBP1Q96B97 665 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 TSSK3Q96PN8 268 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 RAB11FIP5Q9BXF6 653 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 EBPLQ9BY08 206 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 RHBGQ9H310 441 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 CMTM6Q9NX76 183 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 SIRT5Q9NXA8 310 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 GMPR2Q9P2T1 348 aaKnown RBP12.35□□□□□ -0.43
PVT1-203ENST00000513868 RUVBL1Q9Y265 456 aaKnown RBP12.35□□□□□ -0.43
PVT1-203ENST00000513868 THADAQ6YHU6 1953 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 METTL12A8MUP2 240 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 KLHL18O94889 574 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 NPPAP01160 153 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 TNFP01375 233 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 IL6P05231 212 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 PGRP06401 933 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 THEGLP0DJG4 465 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 F3P13726 295 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 PCSK2P16519 638 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 TCN1P20061 433 aaPredicted RBP12.35□□□□□ -0.43
PVT1-203ENST00000513868 CCR8P51685 355 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 PRDX1Q06830 199 aaKnown RBP12.35□□□□□ -0.43
PVT1-203ENST00000513868 ACSM2AQ08AH3 577 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 KRT33BQ14525 404 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 RCN1Q15293 331 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 SAMD4BQ5PRF9 694 aaKnown RBP12.35□□□□□ -0.43
PVT1-203ENST00000513868 ACSM2BQ68CK6 577 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 PRMT9Q6P2P2 845 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 GALNT18Q6P9A2 607 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 ARMCX6Q7L4S7 300 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 LPCAT2Q7L5N7 544 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 UBALD2Q8IYN6 164 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 GJD3Q8N144 294 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 C1orf52Q8N6N3 182 aaKnown RBP12.35□□□□□ -0.43
PVT1-203ENST00000513868 ANKRD53Q8N9V6 530 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 SLC13A3Q8WWT9 602 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 GTF2H4Q92759 462 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 UBE2E3Q969T4 207 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 TMEM125Q96AQ2 219 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 TESCQ96BS2 214 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 SLC6A18Q96N87 628 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 ZBTB18Q99592 522 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 TRIM8Q9BZR9 551 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 TWSG1Q9GZX9 223 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 SUCOQ9UBS9 1254 aaKnown RBP12.35□□□□□ -0.43
PVT1-203ENST00000513868 INVSQ9Y283 1065 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 COLEC10Q9Y6Z7 277 aa12.35□□□□□ -0.43
PVT1-203ENST00000513868 SPAG17Q6Q759 2223 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 H7BY64 318 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 BCAS2O75934 225 aaPredicted RBP12.34□□□□□ -0.43
PVT1-203ENST00000513868 TGFB1P01137 390 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 CELA2BP08218 269 aaPredicted RBP12.34□□□□□ -0.43
PVT1-203ENST00000513868 RPS9P46781 194 aaKnown RBP12.34□□□□□ -0.43
PVT1-203ENST00000513868 C21orf58P58505 322 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 CSNK1G2P78368 415 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 REEP5Q00765 189 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 TRIM25Q14258 630 aaKnown RBP12.34□□□□□ -0.43
PVT1-203ENST00000513868 SPIN4Q56A73 249 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 ZNF542PQ5EBM4 170 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.34□□□□□ -0.43
PVT1-203ENST00000513868 FAM9CQ8IZT9 166 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 KRT78Q8N1N4 520 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 CAMKK1Q8N5S9 505 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 DEFB119Q8N690 84 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 MAFAQ8NHW3 353 aaPredicted RBP12.34□□□□□ -0.43
PVT1-203ENST00000513868 DNAJB14Q8TBM8 379 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 JPH3Q8WXH2 748 aaPredicted RBP12.34□□□□□ -0.43
PVT1-203ENST00000513868 SNX19Q92543 992 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 STMN2Q93045 179 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 ASB9Q96DX5 294 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 PRAP1Q96NZ9 151 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 AIF1LQ9BQI0 150 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 OR51B5Q9H339 312 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 NT5DC2Q9H857 520 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 S100A14Q9HCY8 104 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 SPHK1Q9NYA1 384 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 STX18Q9P2W9 335 aaKnown RBP12.34□□□□□ -0.43
PVT1-203ENST00000513868 PCDHB11Q9Y5F2 797 aa12.34□□□□□ -0.43
PVT1-203ENST00000513868 TRBV23OR9-2A0A075B6M9 112 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 FEZF1A0PJY2 475 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 K7ESF4 209 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 LCMT2O60294 686 aaKnown RBP12.33□□□□□ -0.44
PVT1-203ENST00000513868 FKBP6O75344 327 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 LRATO95237 230 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 WNT1P04628 370 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 CD27P26842 260 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 NDUFS1P28331 727 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 PWP1Q13610 501 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 RABL3Q5HYI8 236 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 C6orf10Q5SRN2 563 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 NANOGP8Q6NSW7 305 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 AAGABQ6PD74 315 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 IYDQ6PHW0 289 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms