RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 ZBTB2Q8N680 514 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 BCORP1Q8N888 145 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 CLEC1AQ8NC01 280 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 KIAA0895Q8NCT3 520 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 C1orf131Q8NDD1 294 aaKnown RBP3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 OR6K2Q8NGY2 324 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 DNAJB14Q8TBM8 379 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 SLC37A2Q8TED4 501 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 PPP4R1Q8TF05 950 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 TEKT4Q8WW24 435 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 ZNF606Q8WXB4 792 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 STON2Q8WXE9 905 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 INPP5DQ92835 1189 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 RFKQ969G6 155 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 REPS1Q96D71 796 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 ECHDC3Q96DC8 303 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 LYZL4Q96KX0 146 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 DMRTA2Q96SC8 542 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 NPY6RQ99463 290 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 HERPUD2Q9BSE4 406 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 PACSIN1Q9BY11 444 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 AKIRIN1Q9H9L7 192 aaPredicted RBP3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 SYTL2Q9HCH5 934 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 SERTAD4Q9NUC0 356 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 PIGVQ9NUD9 493 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 PNPOQ9NVS9 261 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 COX16Q9P0S2 106 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 CTTNBP2NLQ9P2B4 639 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 CNOT8Q9UFF9 292 aaKnown RBP3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 ZDHHC8Q9ULC8 765 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 STAP1Q9ULZ2 295 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 SUFUQ9UMX1 484 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 CNTN6Q9UQ52 1028 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 SMC3Q9UQE7 1217 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 PLEKHM1Q9Y4G2 1056 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 SEC16AO15027 2179 aa3.55□□□□□ -1.84
PDLIM5-218ENST00000513341 ABCA4P78363 2273 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 ATRQ13535 2644 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 PRRC2AP48634 2157 aaKnown RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 A0A088AWK7 358 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 VSTM5A8MXK1 200 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 E7ENX8 843 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 F5H423 210 aaPredicted RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 I6L893 689 aaPredicted RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 CCL21O00585 134 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 PEX12O00623 359 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 PCDH17O14917 1159 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 P4HA2O15460 535 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 POLR2DO15514 142 aaKnown RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 BUB1O43683 1085 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 DAB1O75553 588 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 TUSC2O75896 110 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 UBXN7O94888 489 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 AMD1P17707 334 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 SERPINA4P29622 427 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 CA7P43166 264 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 ANXA11P50995 505 aaKnown RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 AGFG1P52594 562 aaKnown RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 IST1P53990 364 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 CASP6P55212 293 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 RHOAP61586 193 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 RPS18P62269 152 aaKnown RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 IRX6P78412 446 aaPredicted RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 CDK3Q00526 305 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 TAP2Q03519 686 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 FOLH1Q04609 750 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 DEUP1Q05D60 604 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 RBPJQ06330 500 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 RALGDSQ12967 914 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 GALEQ14376 348 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 ACOX1Q15067 660 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 RABEP1Q15276 862 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 SLC25A52Q3SY17 297 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 LRRC73Q5JTD7 316 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 CACHD1Q5VU97 1274 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 ATG9BQ674R7 924 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 ZNF324BQ6AW86 544 aaPredicted RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 PWWP2BQ6NUJ5 590 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 KLHL35Q6PF15 583 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 TMEM207Q6UWW9 146 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 TMEM26Q6ZUK4 368 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 C11orf57Q6ZUT1 292 aaPredicted RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 ARCQ7LC44 396 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 CHST15Q7LFX5 561 aaPredicted RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 SIDT2Q8NBJ9 832 aaKnown RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 LINC00301Q8NCQ3 95 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 BRIX1Q8TDN6 353 aaKnown RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 MR1Q95460 341 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 CCDC47Q96A33 483 aaKnown RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 DHX58Q96C10 678 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 SLC41A2Q96JW4 573 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 FAM81BQ96LP2 452 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 NT5C1BQ96P26 610 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 OR2M4Q96R27 311 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 VRK1Q99986 396 aaPredicted RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 NCAPGQ9BPX3 1015 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 WDR77Q9BQA1 342 aaPredicted RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 C17orf62Q9BQA9 187 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 BLZF1Q9H2G9 400 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 GSTO2Q9H4Y5 243 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms