RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 CFAP61Q8NHU2 1237 aa13.17□□□□□ -0.3
SPCS3-204ENST00000513139 SIGLEC12Q96PQ1 595 aa13.17□□□□□ -0.3
SPCS3-204ENST00000513139 MIPEPQ99797 713 aa13.17□□□□□ -0.3
SPCS3-204ENST00000513139 FOXC2Q99958 501 aa13.17□□□□□ -0.3
SPCS3-204ENST00000513139 YIPF2Q9BWQ6 316 aa13.17□□□□□ -0.3
SPCS3-204ENST00000513139 CARD6Q9BX69 1037 aa13.17□□□□□ -0.3
SPCS3-204ENST00000513139 TSPAN10Q9H1Z9 355 aaPredicted RBP13.17□□□□□ -0.3
SPCS3-204ENST00000513139 STOX2Q9P2F5 926 aaPredicted RBP13.17□□□□□ -0.3
SPCS3-204ENST00000513139 CIDEBQ9UHD4 219 aa13.17□□□□□ -0.3
SPCS3-204ENST00000513139 PPT2Q9UMR5 302 aa13.17□□□□□ -0.3
SPCS3-204ENST00000513139 NPIPA1Q9UND3 350 aa13.17□□□□□ -0.3
SPCS3-204ENST00000513139 ZKSCAN5Q9Y2L8 839 aa13.17□□□□□ -0.3
SPCS3-204ENST00000513139 A8MUI8 341 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 H0YGG7 62 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 CDK2AP1O14519 115 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 OR1I1O60431 355 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 ZNF189O75820 626 aaPredicted RBP13.16□□□□□ -0.3
SPCS3-204ENST00000513139 APOA4P06727 396 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 ANXA5P08758 320 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 C8orf89P0DMQ9 161 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 PSMB5P28074 263 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 PTPN7P35236 360 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 ARF3P61204 181 aaPredicted RBP13.16□□□□□ -0.3
SPCS3-204ENST00000513139 POU6F1Q14863 301 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 FBXO42Q6P3S6 717 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 HORMAD2Q8N7B1 307 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 DNAAF3Q8N9W5 541 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 METTL21AQ8WXB1 218 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 MMABQ96EY8 250 aaPredicted RBP13.16□□□□□ -0.3
SPCS3-204ENST00000513139 FAM118BQ9BPY3 351 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 UTP23Q9BRU9 249 aaKnown RBP13.16□□□□□ -0.3
SPCS3-204ENST00000513139 KLHL1Q9NR64 748 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 KCNN3Q9UGI6 736 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 EFR3BQ9Y2G0 817 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 SCN3AQ9NY46 2000 aa13.16□□□□□ -0.3
SPCS3-204ENST00000513139 DNHD1Q96M86 4753 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 ZNF407Q9C0G0 2248 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 FFAR3O14843 346 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 GPR42O15529 346 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 NRP2O60462 931 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 VPS26AO75436 327 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 RBP3P10745 1247 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 TPH1P17752 444 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 CD96P40200 585 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 CETN2P41208 172 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 IST1P53990 364 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 OR1C1Q15619 314 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 MEP1AQ16819 746 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 BTBD16Q32M84 506 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 CCDC181Q5TID7 509 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 CES4AQ5XG92 561 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 ZC3H7AQ8IWR0 971 aaKnown RBP13.15□□□□□ -0.3
SPCS3-204ENST00000513139 DMRTC2Q8IXT2 367 aaPredicted RBP13.15□□□□□ -0.3
SPCS3-204ENST00000513139 ANKK1Q8NFD2 765 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 ACTL9Q8TC94 416 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 ASB5Q8WWX0 329 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 NINJ1Q92982 152 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 ZNF559Q9BR84 538 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 DRC3Q9H069 523 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 LRRC40Q9H9A6 602 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 C19orf25Q9UFG5 118 aaPredicted RBP13.15□□□□□ -0.3
SPCS3-204ENST00000513139 RUVBL1Q9Y265 456 aaKnown RBP13.15□□□□□ -0.3
SPCS3-204ENST00000513139 ASB1Q9Y576 335 aa13.15□□□□□ -0.3
SPCS3-204ENST00000513139 A0A1W2PPV9 198 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 CCDC162PA2VCL2 907 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 OR51F1A6NGY5 319 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 TXNDC9O14530 226 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 CEP104O60308 925 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 SUN1O94901 812 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 TJP3O95049 919 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 C1orf105O95561 183 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 DRD2P14416 443 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 FOSL1P15407 271 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 KLK2P20151 261 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 AOAHP28039 575 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 CMPK1P30085 196 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 PPARGP37231 505 aaPredicted RBP13.14□□□□□ -0.31
SPCS3-204ENST00000513139 EFNA3P52797 238 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 EIF3EP60228 445 aaKnown RBP13.14□□□□□ -0.31
SPCS3-204ENST00000513139 TFF3Q07654 80 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 FAM53BQ14153 422 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 TMED2Q15363 201 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 SPINK14Q6IE38 97 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 LRRC8BQ6P9F7 803 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 DARS2Q6PI48 645 aaKnown RBP13.14□□□□□ -0.31
SPCS3-204ENST00000513139 C3P1Q6ZMU1 363 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 CPEB2Q7Z5Q1 589 aaKnown RBP13.14□□□□□ -0.31
SPCS3-204ENST00000513139 TMEM200AQ86VY9 491 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 SLC13A5Q86YT5 568 aaPredicted RBP13.14□□□□□ -0.31
SPCS3-204ENST00000513139 ARHGEF39Q8N4T4 335 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 CSNK1A1LQ8N752 337 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 LILRB4Q8NHJ6 448 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 MS4A14Q96JA4 679 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 CYTH2Q99418 400 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 DPH7Q9BTV6 452 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 HES7Q9BYE0 225 aa13.14□□□□□ -0.31
SPCS3-204ENST00000513139 R3HDM2Q9Y2K5 976 aaKnown RBP13.14□□□□□ -0.31
SPCS3-204ENST00000513139 HRNRQ86YZ3 2850 aaPredicted RBP13.14□□□□□ -0.31
SPCS3-204ENST00000513139 FOXS1O43638 330 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 SEC24DO94855 1032 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms