RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 C9P02748 559 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 ITIH1P19827 911 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 ANOS1P23352 680 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 OAS2P29728 719 aaKnown RBP3.05□□□□□ -1.92
LSM6-205ENST00000507449 SOAT1P35610 550 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 CDKN1AP38936 164 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 FRKP42685 505 aaPredicted RBP3.05□□□□□ -1.92
LSM6-205ENST00000507449 HERV-K104P61576 105 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 ASIC1P78348 528 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 IL10RBQ08334 325 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 OPCMLQ14982 345 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 CCDC158Q5M9N0 1113 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 FFAR4Q5NUL3 377 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 FAM72AQ5TYM5 149 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 FAM72DQ6L9T8 149 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 TTC27Q6P3X3 843 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 CASC4Q6P4E1 433 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 ZNF790Q6PG37 636 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 IYDQ6PHW0 289 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 SLC25A47Q6Q0C1 308 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 G2E3Q7L622 706 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 NOTCH2NLQ7Z3S9 236 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 GPR141Q7Z602 305 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 C5orf24Q7Z6I8 188 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 FAM72BQ86X60 149 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 SNX32Q86XE0 403 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 MEX3DQ86XN8 651 aaKnown RBP3.05□□□□□ -1.92
LSM6-205ENST00000507449 TUSC5Q8IXB3 177 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 RCOR2Q8IZ40 523 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 TDHQ8IZJ6 230 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 NUP93Q8N1F7 819 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 DCLK2Q8N568 766 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 ZNF713Q8N859 430 aaPredicted RBP3.05□□□□□ -1.92
LSM6-205ENST00000507449 CCDC63Q8NA47 563 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 OR7A2PQ8NGA2 310 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 APOBEC4Q8WW27 367 aaKnown RBP3.05□□□□□ -1.92
LSM6-205ENST00000507449 TEKT1Q969V4 418 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 SNRNP40Q96DI7 357 aaKnown RBP3.05□□□□□ -1.92
LSM6-205ENST00000507449 AK8Q96MA6 479 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 HNRNPABQ99729 332 aaKnown RBP3.05□□□□□ -1.92
LSM6-205ENST00000507449 PANK2Q9BZ23 570 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 LSG1Q9H089 658 aaKnown RBP3.05□□□□□ -1.92
LSM6-205ENST00000507449 MMADHCQ9H3L0 296 aaPredicted RBP3.05□□□□□ -1.92
LSM6-205ENST00000507449 SRD5A3Q9H8P0 318 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 IARS2Q9NSE4 1012 aaKnown RBP3.05□□□□□ -1.92
LSM6-205ENST00000507449 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.05□□□□□ -1.92
LSM6-205ENST00000507449 ABCB8Q9NUT2 735 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 DNAJC17Q9NVM6 304 aaKnown RBP3.05□□□□□ -1.92
LSM6-205ENST00000507449 TMEM181Q9P2C4 612 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 TCF19Q9Y242 345 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 PYGO1Q9Y3Y4 419 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 WDR81Q562E7 1941 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 A0A0B4J203 849 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 TMEM150CB9EJG8 249 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 KBTBD13C9JR72 458 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 KLF11O14901 512 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 PCDH7O60245 1069 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 GOSR1O95249 250 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 SEC24AO95486 1093 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 EML2O95834 649 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 MOCS2O96007 188 aaPredicted RBP3.04□□□□□ -1.92
LSM6-205ENST00000507449 PAK4O96013 591 aaPredicted RBP3.04□□□□□ -1.92
LSM6-205ENST00000507449 SP100P23497 879 aaPredicted RBP3.04□□□□□ -1.92
LSM6-205ENST00000507449 SSTR1P30872 391 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 CHRNB4P30926 498 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 GLIPR1P48060 266 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 LEPRP48357 1165 aaKnown RBP3.04□□□□□ -1.92
LSM6-205ENST00000507449 DNA2P51530 1060 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 LBX1P52954 281 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 OR1D5P58170 312 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 ST8SIA6P61647 398 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 GLRA4Q5JXX5 417 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 SPOUT1Q5T280 376 aaKnown RBP3.04□□□□□ -1.92
LSM6-205ENST00000507449 LCN1P1Q5VSP4 162 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 KLHL10Q6JEL2 608 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 PSRC1Q6PGN9 363 aaPredicted RBP3.04□□□□□ -1.92
LSM6-205ENST00000507449 LEKR1Q6ZMV7 388 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 LACC1Q8IV20 430 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 CCDC60Q8IWA6 550 aaPredicted RBP3.04□□□□□ -1.92
LSM6-205ENST00000507449 AQP12AQ8IXF9 295 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.04□□□□□ -1.92
LSM6-205ENST00000507449 TMEM178AQ8NBL3 297 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 SLC37A3Q8NCC5 494 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 OR5AP2Q8NGF4 316 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 FAM76AQ8TAV0 307 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 AFAP1L1Q8TED9 768 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 DNASE2BQ8WZ79 361 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 CDCA3Q99618 268 aaPredicted RBP3.04□□□□□ -1.92
LSM6-205ENST00000507449 ATG101Q9BSB4 218 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 FSD1Q9BTV5 496 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 MTMR12Q9C0I1 747 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 EGLN3Q9H6Z9 239 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 ZNF696Q9H7X3 374 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 MRPL17Q9NRX2 175 aaKnown RBP3.04□□□□□ -1.92
LSM6-205ENST00000507449 MAN2C1Q9NTJ4 1040 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 C2orf42Q9NWW7 574 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 CWC25Q9NXE8 425 aaPredicted RBP3.04□□□□□ -1.92
LSM6-205ENST00000507449 RNF186Q9NXI6 227 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 VPS18Q9P253 973 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 EPHA6Q9UF33 1036 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms