RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 PIWIL4Q7Z3Z4 852 aaKnown RBP10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 LRRC56Q8IYG6 542 aaPredicted RBP10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 CPNE9Q8IYJ1 553 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 AGGF1Q8N302 714 aaeCLIP10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 AMER2Q8N7J2 671 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 MCUQ8NE86 351 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 CD200R1Q8TD46 325 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 ASB11Q8WXH4 323 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 KCNJ9Q92806 393 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 MAGOHBQ96A72 148 aaKnown RBP10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 SERPINB12Q96P63 405 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 TGIF2Q9GZN2 237 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 XAB2Q9HCS7 855 aaKnown RBP10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 C20orf96Q9NUD7 363 aaPredicted RBP10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 KLHL42Q9P2K6 505 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 DHRS7Q9Y394 339 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 TEX15Q9BXT5 2789 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 TRAV17A0A0B4J275 112 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 MAGEB16A2A368 324 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 H7BY64 318 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 GFYI3L273 518 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 PCDH17O14917 1159 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 ZBTB14O43829 449 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 JRKO75564 520 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 WFS1O76024 890 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 F10P00742 488 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 ITGAMP11215 1152 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 SKIV2L2P42285 1042 aaKnown RBP10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 TNFSF10P50591 281 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 TBPL1P62380 186 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 CCZ1BP86790 482 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 CCZ1P86791 482 aaPredicted RBP10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 MPP1Q00013 466 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 INAQ16352 499 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 NDUFA9Q16795 377 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 LONRF1Q17RB8 773 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 ZNF324BQ6AW86 544 aaPredicted RBP10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 TMEM205Q6UW68 189 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 RIPOR1Q6ZS17 1223 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 UBE2R2Q712K3 238 aaPredicted RBP10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 OR9A4Q8NGU2 314 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 MS4A14Q96JA4 679 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 PRAP1Q96NZ9 151 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 TAAR6Q96RI8 345 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 EBNA1BP2Q99848 306 aaKnown RBP10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 ZNF700Q9H0M5 742 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 CCDC177Q9NQR7 707 aaPredicted RBP10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 FBXO5Q9UKT4 447 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 MKL2Q9ULH7 1088 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 MAD1L1Q9Y6D9 718 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 COMMD10Q9Y6G5 202 aa10.94□□□□□ -0.66
HMGCS1-204ENST00000507293 ZG16O60844 167 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 SEC24DO94855 1032 aaPredicted RBP10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 STSP08842 583 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 C8orf89P0DMQ9 161 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 COILP38432 576 aaPredicted RBP10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 MAGEA3P43357 314 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 AVPR1BP47901 424 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 TDGF1P3P51864 188 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 KCNK10P57789 538 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 FAM53BQ14153 422 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 ZRSR2Q15696 482 aaKnown RBP10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 MFSD4BQ5TF39 518 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 C1QL3Q5VWW1 255 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 HIBCHQ6NVY1 386 aaPredicted RBP10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 PRSS41Q7RTY9 318 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 VN1R4Q7Z5H5 301 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 FJX1Q86VR8 437 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 LRRC8AQ8IWT6 810 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 LMNTD2Q8IXW0 634 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 SHISA5Q8N114 240 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 RASGEF1CQ8N431 466 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 CALML6Q8TD86 181 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 NR4A3Q92570 626 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 HAS2Q92819 552 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 NDNQ99608 321 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 FAM167BQ9BTA0 163 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 AARSD1Q9BTE6 412 aaKnown RBP10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 TMEM184CQ9NVA4 438 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 SH2B3Q9UQQ2 575 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 PPP2R2CQ9Y2T4 447 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 NEU2Q9Y3R4 380 aa10.93□□□□□ -0.66
HMGCS1-204ENST00000507293 NOTCH2Q04721 2471 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 NBPF19A0A087WUL8 3843 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 IGHV3-20A0A0C4DH32 117 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 A0A1B0GUH1 482 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 H0YIG0 161 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 HAUS5O94927 633 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 NSA2O95478 260 aaKnown RBP10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 WDPCPO95876 746 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 IL1RNP18510 177 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 RPS15AP62244 130 aaKnown RBP10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 AP2B1P63010 937 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 ZNF33BQ06732 778 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 CYP1B1Q16678 543 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 MINDY4Q4G0A6 757 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 HSP90AA5PQ58FG0 334 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 ABHD17BQ5VST6 288 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 CCDC137Q6PK04 289 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms