RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 DHPSP49366 369 aaPredicted RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 RENBPP51606 427 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ARSFP54793 590 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC7A9P82251 487 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC3A1Q07837 685 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 GPR50Q13585 617 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 EIF2S3LQ2VIR3 472 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF284Q2VY69 593 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TTLL9Q3SXZ7 439 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 C5orf22Q49AR2 442 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 EEF1DP3Q658K8 133 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM198Q66K66 360 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 SH2D5Q6ZV89 423 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CAMKMTQ7Z624 323 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CAMK1DQ8IU85 385 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 SPPL2CQ8IUH8 684 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 LACC1Q8IV20 430 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 C8orf59Q8N0T1 100 aaPredicted RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 PQLC1Q8N2U9 271 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 C9orf62Q8N4C0 152 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TERB1Q8NA31 727 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CA5BP1Q8WTZ4 195 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 FAR1Q8WVX9 515 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ZC3H10Q96K80 434 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 DMRTB1Q96MA1 342 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 RIPOR3Q96MK2 946 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 LINC00052Q96N35 136 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF347Q96SE7 839 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 GAD1Q99259 594 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC25A23Q9BV35 468 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ARHGAP39Q9C0H5 1083 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 PRDM13Q9H4Q3 707 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TRIM45Q9H8W5 580 aaPredicted RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 AGO4Q9HCK5 861 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 HMG20AQ9NP66 347 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 GKN1Q9NS71 199 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC17A6Q9P2U8 582 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 LSM7Q9UK45 103 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC5A6Q9Y289 635 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 SPTBN2O15020 2390 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CEP350Q5VT06 3117 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 A0A1W2PQ72 361 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 RGSL1A5PLK6 1076 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 C9IYK1 514 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 F5H5T6 163 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 H0YJX3 145 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 AREL1O15033 823 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ATXN7O15265 892 aaPredicted RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 RAMP2O60895 175 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 NOS1APO75052 506 aaPredicted RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 HTR3BO95264 441 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ALDH1A1P00352 501 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 DHFRP00374 187 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 PROS1P07225 676 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 RHOCP08134 193 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 SNRPB2P08579 225 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CD63P08962 238 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 PNLIPP16233 465 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CD36P16671 472 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 JUNDP17535 347 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TUBG1P23258 451 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 DPP6P42658 865 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CRATP43155 626 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 FNTBP49356 437 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 NT5C2P49902 561 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 DGKEP52429 567 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ERVFC1P60507 584 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ACTBP60709 375 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ACTA2P62736 377 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ACTG1P63261 375 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ACTG2P63267 376 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ACTC1P68032 377 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ACTA1P68133 377 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 MXD1Q05195 221 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TUBB3Q13509 450 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CAMK2GQ13555 558 aaPredicted RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 C1DQ13901 141 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 MFSD10Q14728 455 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 DHCR24Q15392 516 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 MED22Q15528 200 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 PTPRNQ16849 979 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 DGUOKQ16854 277 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM187BQ17R55 369 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 PNLIPRP3Q17RR3 467 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM119Q4V9L6 283 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ACTBL2Q562R1 376 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 RPS26P11Q5JNZ5 115 aaPredicted RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TDRD10Q5VZ19 366 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 MFSD14CQ5VZR4 134 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 WSCD1Q658N2 575 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CLEC6AQ6EIG7 209 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 FBXO46Q6PJ61 603 aaPredicted RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CNSTQ6PJW8 725 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CHSY3Q70JA7 882 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 MON1AQ86VX9 555 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 C4orf19Q8IY42 314 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 UBQLNLQ8IYU4 475 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 C2orf73Q8N5S3 287 aaPredicted RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 DPP10Q8N608 796 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 GMCL1P1Q8NEA9 526 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms