RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 NKX2-1P43699 371 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 RGS7P49802 495 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 NT5C2P49902 561 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 GMPSP49915 693 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 VAMP7P51809 220 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 CLDN15P56746 228 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 KRTAP10-8P60410 259 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 PTENP60484 403 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 HERV-K104P61576 105 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 KCNJ10P78508 379 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 ARF5P84085 180 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 ACTN3Q08043 901 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 RASGEF1BQ0VAM2 473 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 ILF2Q12905 390 aaKnown RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 RPA4Q13156 261 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 GPR17Q13304 367 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 TNK1Q13470 666 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 TRIM29Q14134 588 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 SQLEQ14534 574 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 LASP1Q14847 261 aaKnown RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 HERC3Q15034 1050 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 RRS1Q15050 365 aaKnown RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 P2RY6Q15077 328 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 PTGISQ16647 500 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 CTU2Q2VPK5 515 aaKnown RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 KIAA1644Q3SXP7 199 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 FAM174BQ3ZCQ3 159 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 NHSL2Q5HYW2 709 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 SLC35D3Q5M8T2 416 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 C20orf194Q5TEA3 1177 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 FAM72AQ5TYM5 149 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 ARHGEF16Q5VV41 709 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 OR4A47Q6IF82 309 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 GALNT17Q6IS24 598 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 FAM72DQ6L9T8 149 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 TMEM182Q6ZP80 229 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 SH2D5Q6ZV89 423 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 OTOAQ7RTW8 1153 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 NRARPQ7Z6K4 114 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 PIGZQ86VD9 579 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 FAM72BQ86X60 149 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 DZIP1Q86YF9 867 aaKnown RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 TUSC5Q8IXB3 177 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 TIGD4Q8IY51 512 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 NOA1Q8NC60 698 aaKnown RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 OR10Q1Q8NGQ4 319 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 OR13C3Q8NGS6 347 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 PSMA8Q8TAA3 256 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 C9orf43Q8TAL5 461 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 GRAPLQ8TC17 118 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 SPATA18Q8TC71 538 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 RAD54LQ92698 747 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 MR1Q95460 341 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 CENPTQ96BT3 561 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 ERO1AQ96HE7 468 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 C16orf45Q96MC5 204 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 RUNDC3BQ96NL0 473 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 PGLYRP2Q96PD5 576 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 INPP5KQ9BT40 448 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 SPXQ9BT56 116 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 MLPHQ9BV36 600 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 SHARPINQ9H0F6 387 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 C1orf21Q9H246 121 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 CPVLQ9H3G5 476 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 THAP9Q9H5L6 903 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 TLE6Q9H808 572 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 SLC52A3Q9NQ40 469 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 ABCB8Q9NUT2 735 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 INTS9Q9NV88 658 aaKnown RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 DCAF16Q9NXF7 216 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 TBK1Q9UHD2 729 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 SH3BGRL2Q9UJC5 107 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 LEF1Q9UJU2 399 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 RABL2BQ9UNT1 228 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 TNNQ9UQP3 1299 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 TCF19Q9Y242 345 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 KCNK7Q9Y2U2 307 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 C2CD2Q9Y426 696 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 SMAD5-AS1Q9Y6J3 95 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 SPAG9O60271 1321 aaKnown RBP2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 STK36Q9NRP7 1315 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 RNF103-CHMP3A0A140T963 221 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 A4D1N5 150 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 RNF103O00237 685 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 ZNF263O14978 683 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 PRPSAP2O60256 369 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 PRAF2O60831 178 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 KINO60870 393 aaKnown RBP2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 NOL3O60936 208 aaKnown RBP2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 RTN2O75298 545 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 TRMUO75648 421 aaKnown RBP2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 DFFBO76075 338 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 PGLSO95336 258 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 OLFM2O95897 454 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 CLPTM1O96005 669 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 SERPING1P05155 500 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 STAG3L1P0CL83 205 aa2.18□□□□□ -2.06
HMGB1P35-201ENST00000503360 PRSS56P0CW18 603 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms