RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 CYTH2Q99418 400 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 VKORC1Q9BQB6 163 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 TMEM121Q9BTD3 319 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 CATSPERZQ9NTU4 200 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 UTP6Q9NYH9 597 aaKnown RBP13.17□□□□□ -0.3
CCDC58-207ENST00000498466 GNPTGQ9UJJ9 305 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 RIMKLBQ9ULI2 386 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 PCDHA13Q9Y5I0 950 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 PCNX1Q96RV3 2341 aa13.16□□□□□ -0.3
CCDC58-207ENST00000498466 IGKV1-8A0A0C4DH67 115 aa13.16□□□□□ -0.3
CCDC58-207ENST00000498466 TXNDC9O14530 226 aa13.16□□□□□ -0.3
CCDC58-207ENST00000498466 PKMP14618 531 aaKnown RBP13.16□□□□□ -0.3
CCDC58-207ENST00000498466 TTPAP49638 278 aa13.16□□□□□ -0.3
CCDC58-207ENST00000498466 ACVR1Q04771 509 aa13.16□□□□□ -0.3
CCDC58-207ENST00000498466 FAM53BQ14153 422 aa13.16□□□□□ -0.3
CCDC58-207ENST00000498466 NDUFA9Q16795 377 aa13.16□□□□□ -0.3
CCDC58-207ENST00000498466 ADCK2Q7Z695 626 aa13.16□□□□□ -0.3
CCDC58-207ENST00000498466 SIAH3Q8IW03 269 aa13.16□□□□□ -0.3
CCDC58-207ENST00000498466 ARHGEF39Q8N4T4 335 aa13.16□□□□□ -0.3
CCDC58-207ENST00000498466 HORMAD2Q8N7B1 307 aa13.16□□□□□ -0.3
CCDC58-207ENST00000498466 SMPDL3AQ92484 453 aa13.16□□□□□ -0.3
CCDC58-207ENST00000498466 OR2A5Q96R48 311 aa13.16□□□□□ -0.3
CCDC58-207ENST00000498466 DMRTA2Q96SC8 542 aa13.16□□□□□ -0.3
CCDC58-207ENST00000498466 TREX2Q9BQ50 279 aaPredicted RBP13.16□□□□□ -0.3
CCDC58-207ENST00000498466 TRIM51Q9BSJ1 452 aa13.16□□□□□ -0.3
CCDC58-207ENST00000498466 MARCH4Q9P2E8 410 aaPredicted RBP13.16□□□□□ -0.3
CCDC58-207ENST00000498466 PCYOX1Q9UHG3 505 aa13.16□□□□□ -0.3
CCDC58-207ENST00000498466 NIPBLQ6KC79 2804 aaeCLIP13.16□□□□□ -0.3
CCDC58-207ENST00000498466 SOWAHDA6NJG2 315 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 ERI2A8K979 691 aaKnown RBP13.15□□□□□ -0.3
CCDC58-207ENST00000498466 GABRR3A8MPY1 467 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 AKR1B15C9JRZ8 316 aaPredicted RBP13.15□□□□□ -0.3
CCDC58-207ENST00000498466 ADAM10O14672 748 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 CD3EAPO15446 510 aaKnown RBP13.15□□□□□ -0.3
CCDC58-207ENST00000498466 P2RX6O15547 441 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 SUN1O94901 812 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 SP1P08047 785 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 CD99P14209 185 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 EZRP15311 586 aaKnown RBP13.15□□□□□ -0.3
CCDC58-207ENST00000498466 GRIA1P42261 906 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 NAP1L1P55209 391 aaKnown RBP13.15□□□□□ -0.3
CCDC58-207ENST00000498466 SPA17Q15506 151 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 EXT1Q16394 746 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 MAPKAPK3Q16644 382 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 ANKRD20A4Q4UJ75 823 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 OR9A1PQ8NGU1 263 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 OR9A4Q8NGU2 314 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 ALG3Q92685 438 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 NPAS2Q99743 824 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 P2RY12Q9H244 342 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 TAC3Q9UHF0 121 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 TCAF1Q9Y4C2 921 aa13.15□□□□□ -0.3
CCDC58-207ENST00000498466 ZNF469Q96JG9 3925 aaPredicted RBP13.14□□□□□ -0.31
CCDC58-207ENST00000498466 OR2W5A6NFC9 320 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 E7EVH7 732 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 H0YIG0 161 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 MAN1A2O60476 641 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 NDUFS3O75489 264 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 CCNDBP1O95273 360 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 CYC1P08574 325 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 ERGP11308 486 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 ZNF24P17028 368 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 AGTR2P50052 363 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 EIF3BP55884 814 aaKnown RBP13.14□□□□□ -0.31
CCDC58-207ENST00000498466 PRDX1Q06830 199 aaKnown RBP13.14□□□□□ -0.31
CCDC58-207ENST00000498466 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.14□□□□□ -0.31
CCDC58-207ENST00000498466 ICE2Q659A1 982 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 ZNF425Q6IV72 752 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 SLC25A25Q6KCM7 469 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 ANKRD37Q7Z713 158 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 TMEM200AQ86VY9 491 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 LRRC6Q86X45 466 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 CHERPQ8IWX8 916 aaKnown RBP13.14□□□□□ -0.31
CCDC58-207ENST00000498466 SLC5A8Q8N695 610 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 PPHLN1Q8NEY8 458 aaKnown RBP13.14□□□□□ -0.31
CCDC58-207ENST00000498466 OR51Q1Q8NH59 317 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 M1APQ8TC57 530 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 MCOLN3Q8TDD5 553 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 ETNK1Q9HBU6 452 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 MMP25Q9NPA2 562 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 ABCF3Q9NUQ8 709 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 LRFN1Q9P244 771 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 ASB1Q9Y576 335 aa13.14□□□□□ -0.31
CCDC58-207ENST00000498466 DNHD1Q96M86 4753 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 ARHGEF33A8MVX0 844 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 FOXO6A8MYZ6 492 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 HAT1O14929 419 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 NEURL1O76050 574 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 MATN4O95460 622 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 STATHP02808 62 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 HOXB4P17483 251 aaPredicted RBP13.13□□□□□ -0.31
CCDC58-207ENST00000498466 XCR1P46094 333 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 PNLIPRP1P54315 467 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 TAS2R50P59544 299 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 SNRPNP63162 240 aaKnown RBP13.13□□□□□ -0.31
CCDC58-207ENST00000498466 ACTN3Q08043 901 aaPredicted RBP13.13□□□□□ -0.31
CCDC58-207ENST00000498466 PTK6Q13882 451 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 PAPD4Q6PIY7 484 aaKnown RBP13.13□□□□□ -0.31
CCDC58-207ENST00000498466 CEP128Q6ZU80 1094 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 FGD2Q7Z6J4 655 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms